KEGG   Mycobacterium sp. djl-10: BCA37_09055
Entry
BCA37_09055       CDS       T10620                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
myj  Mycobacterium sp. djl-10
Brite
KEGG Orthology (KO) [BR:myj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myj03400]
    BCA37_09055
Enzymes [BR:myj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BCA37_09055
    5.6.2.6  RNA 3'-5' helicase
     BCA37_09055
DNA repair and recombination proteins [BR:myj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BCA37_09055
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_2nd_Lhr WHD_3rd_Lhr Helicase_C ResIII PhoH AAA_25 DUF6406
Other DBs
NCBI-ProteinID: ANW63727
LinkDB
Position
complement(1825915..1830456)
AA seq 1513 aa
MPVTTDPLLRFSPLTRQWFAGTFVEPTPAQAQAWNAIADGDNTLVIAPTGSGKTLAAFLW
AIDQLTGPLDLDRTPGTSVLYVSPLKALAVDVERNLRTPLTGIGRVAEREGSAPPQISVG
VRSGDTTPAKRRELITKPPDILITTPESLFLMLTSAARETLAGVRTVIVDEVHAVANTKR
GAHLALSLERLDALLEKPAQRIGLSATVRPAEEVARFLSGPAPVTIVAPPAAKTFELTVQ
VPVPDMANLENNSIWPDVEERIVDLIETHRSSIVFANSRRLAERLTARLNEIHAERTGVE
LSGERNPGVPGGPPAHIMGSGQSFGAEPVLARAHHGSVSKETRADVEDALKSGRLKAVVA
TSSLELGIDMGSVDLVIQVETPPSVASGLQRIGRAGHQVGEISRGVLFPKHRTDLIGCAV
SVQRMLAGQIETMHVPGNPLDVLAQHTVAACALEPLNADGWFDTVRRSAPFATLPRSAFE
ATLDLLSGKYPSTDFAELRPRVVYDRDTGTVTARPGAQRLAVTSGGAIPDRGLFTVYLAS
SADSEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVIPAPGEPARLPFWR
GDAVGRPAELGAAVGAFTGELSRMDRTAFEKRCTTIGFNDFAVDNLWRLLDEQKEATGTV
PTDTTLVVERFRDELGDWRVVLHSPYGLRVHGPLALAIGKRLYERFGIDEKPTASDDGII
LRLPDTDETAPGADLFVFDPDEIEPLVTTEVGGSALFASRFRECAARALLLPRRHPGKRS
PLWHQRQRAAQLLDVARKYPDFPIVLEAVRECLQDVYDVPMLTDLMGRIAQRRIKVVEVE
TSMPSPFAASLLFGYVGAFMYEGDSPLAERRAAALSLDSTLLAELLGRVELRELLDADVI
TSTGRQLQHLTPERAVRDAEGLADLLRLLGPLTEDEATERSTADDVGGWLHGLFDAKRVL
RVAFADRTWWVAIEDIGRLRDGVGVAVPVGVPATFTESVKDPLGELLGRYARTHGPFTTV
DAAARFGLGLRVAADVLGRLAVDGKLVRGEFTDAEGEQWCDAEVLRILRRRSLAALRAQV
EPVSTAAYARFLPGWQQLGTASGIDGLAGVIEQLSGVPMPASAVEPLIFGQRVRGYTPAM
LDELLASGEVLWSGAGALAGGDGWVAFHTADTAPLTLTAPSEMDLTDVHTGLLDILGRPG
DAHGAFFFRQLVAGGVSESSLKEALWQLIWAGWITGDTFAPVRALLSGGRRPGARKPATP
THRTRRAPRLSRYSVANPQARTVDATVAGRWSALPATEQDSTLRAHFSAELLLGRYGVLT
KGSVASENLPGGFATLYKVLSLFEDSGRCQRGYFVESLGGAQFSTASTVDRLRTHADSVD
DQRGERTAVALAATDPANPFGAALPWPVRDAEADTAHRPGRKAGALVVLVDGELAWFLER
GGRSLLSFTADPEALNVAAAALSDLVTQRRVDGLLVERINGAAVLDPGADHAAVSAALTA
AGFSRTPRGLRLR
NT seq 4542 nt   +upstreamnt  +downstreamnt
gtgcccgtcaccaccgacccgctgctccggttcagcccactgacccggcagtggttcgcg
ggcacgttcgtcgagcccaccccggcccaggcgcaggcgtggaacgcgatcgccgacggc
gacaacacgctggtcatcgctcccaccggttccggcaagaccctggcggcgttcctgtgg
gccatcgaccagctgaccggcccgctcgacctcgaccgcacgcccggcaccagcgtgctc
tacgtgtcgcccctcaaagcgctcgccgtcgacgtcgagcgcaacctgcgcacccccctg
accggcatcggccgcgtcgccgaacgggagggttcggcgccgccgcagatcagcgtcggc
gtgcgctcgggcgacaccacacccgccaagcgccgcgaactcatcaccaaaccaccggac
atcctcatcaccacgccggaatcgttgttcctcatgctcacttccgcagccagggagacg
ctggccggagtccgcaccgtgatcgtcgacgaggtgcacgccgtcgccaacaccaagcgg
ggcgcccacctggccctgtcgctggagcgcctcgacgccctgctcgagaaacctgcgcag
cgcatcgggctgtctgccaccgtccgccccgctgaggaggtggcccggttcctctcgggg
cccgccccggtcaccatcgtcgccccgcctgcggccaagaccttcgagctcaccgtccag
gtgccggtgccggacatggccaacctggagaacaacagcatctggcccgatgtggaagag
cgcatcgtcgacctcatcgagacccaccgttcgtcgatcgtgttcgccaacagtcgccgc
ctcgccgagcgactgaccgcgcggctcaacgagattcacgccgagcgcaccggggtcgaa
ctctccggtgagcgcaaccccggcgtgcccggcggcccacccgcccacatcatgggcagc
ggtcagagtttcggcgccgagcccgtgctggcccgcgcccaccacggatcggtcagcaag
gagacccgcgccgacgtcgaggacgcgctcaagagcggccgactcaaggccgtggtcgcc
acctccagcctcgagctgggcatcgacatgggctcggtcgacctggtgatccaggtggag
acgcccccctcggtggccagcggcctgcagcgcatcggccgggcgggtcaccaggtgggc
gagatctcccgcggcgtgctgttcccgaagcaccgcacggacctgatcggctgcgcggtg
tcggtgcagcgcatgctggccggtcagatcgagaccatgcatgtaccgggcaatccgctc
gacgtgctggcccagcacaccgtcgcagcctgtgcgctggagccgttgaacgccgacggc
tggttcgacacggtccggcgcagcgcccccttcgcgacactgccgcgcagtgcgttcgaa
gcgaccctggatctgctgtcgggcaagtatccatccaccgatttcgccgagctccggccg
cgggtggtctatgaccgcgacaccggtaccgtcaccgcccggcccggcgcgcaacgcctc
gccgtcacctccggcggcgccatccccgaccgcggcctgttcaccgtctacctggcctcc
agcgcagactccgaaaagccctcgcgggtgggcgaactcgacgaagagatggtctacgag
tcccggcccggcgacgtcatctccctgggcgccaccagctggcggatcaccgagatcacc
cacgaccgggtgctggtcatccccgcgcccggagaacccgcccggctgccgttctggcgc
ggcgacgcggtgggccggcccgccgagctcggcgccgcagtgggagccttcaccggcgag
ctgtcccggatggaccgcaccgccttcgaaaagcgttgcaccacaattggattcaacgac
ttcgcggtggacaacctgtggcgtctgctcgacgagcagaaagaggccacgggcaccgtt
cccaccgacaccacgctggtggtggaacgcttccgcgacgagctgggtgactggcgggtg
gtcctgcactccccctacggcctgcgggtgcacgggcccctggcgctggccatcggcaag
cggctctacgagcggttcggcatcgacgagaagcccaccgcgtccgacgacggcatcatc
ctgcgactgcccgacaccgacgagaccgcgcctggggcagacctgttcgtgttcgacccc
gacgagatcgagccgctggtcaccaccgaggtgggcggttcggcgctgttcgcctcccgg
ttccgggagtgcgcggcacgggcgctgctgctgccacgccgccatcccggcaagcgctcc
ccactgtggcaccagcgtcagcgcgccgcgcagctgctcgatgtggcgcgtaagtacccc
gactttcccatcgtgctggaggcggtgcgggagtgcctccaggatgtctacgacgtcccg
atgctgaccgacctgatgggccggatcgcccagcggcgcatcaaggtggtcgaggtcgag
acgtccatgccctcaccgttcgcggcatcgctgctgttcggctacgtcggggccttcatg
tacgaaggcgacagcccgctggccgaacgccgggccgcggccctgtcgctggattccacc
ctgctggccgaactcctgggccgggtcgagttgcgcgaactgctcgatgccgacgtcatc
acctccaccggccgccagctgcagcacctcacccccgagcgggcggtgcgcgacgccgag
ggcctggccgacctgctacgcctgctcggtcccctcaccgaggacgaggccaccgaacgc
agcaccgccgacgatgtgggcggctggctgcacggcctgttcgacgccaagcgggtgctg
cgggtggccttcgccgaccgcacctggtgggtggccatcgaagacatcggccggttgcgc
gacggggtgggtgtcgccgtgccggtcggagtgcccgccaccttcaccgaatcggtcaag
gatcccctgggcgagctgctgggccgttatgcgcgcacccatggaccgttcaccaccgta
gacgccgcggcgcgattcgggctggggctgcgggtggccgccgatgtgctgggccgcctg
gcggtcgacggcaaactggtgcgcggcgaattcaccgatgccgagggtgagcagtggtgt
gacgcggaggtgctgcgcatcctgcgccgccggtcactggcagcgctgcgggcccaggtc
gaaccggtcagcaccgcggcctacgcccggttcctgcccgggtggcaacagctggggacc
gcatcgggcatcgacgggctggccggggtgatcgaacaactctcgggcgttccgatgccg
gcgtcggcggtggagccgctgatcttcgggcaacgggtgcgcggctacaccccggcgatg
ctcgacgagctgctggcctccggcgaggtgctgtggtccggcgccggggcgctggccggc
ggtgacggctgggtggcgttccacaccgccgacaccgcgccgctgaccctgaccgcaccc
tcggagatggacctcaccgacgtgcacaccggtctgctggacatcctcggccggcccggt
gacgcgcacggcgccttcttcttccggcaactggtggccggtggtgtgtccgagagttcc
ctcaaagaggcactgtggcaactcatctgggcaggctggatcaccggtgacacctttgcg
ccggtgcgggccctactctcgggcggccgccgacccggggcgcgcaagccggctactccg
actcaccgcacccggcgggcaccgcggctgtcgcgctacagcgtggccaacccgcaggcg
cgcaccgtggacgccacggtggccggccgctggtcggctctgcctgcgaccgagcaggat
tcgacgctgcgcgcccatttctccgccgagctgctgctgggtcgctacggggttctgacc
aagggttcggtggcctcggagaatctaccgggcgggttcgccaccctgtacaaggtgctg
tcgctgttcgaagacagcggccgctgccagcgcggctacttcgtcgaatcactgggcgga
gcacagttttcgacggcctccaccgtggaccggctgcgcacccacgccgactcggtcgac
gaccagcgtggcgagcgcactgccgtggccctggcggccaccgacccggccaatccgttc
ggtgccgcgctgccgtggccggtacgcgatgccgaggccgacacggcgcaccgtccgggc
cgcaaggccggcgcgctggtggtactggtcgacggcgagctggcctggttcctggaacgt
ggtggccgctcgctgctgagcttcaccgccgaccccgaggcgctcaatgtcgccgccgcg
gcgctgtcggacctggtgacccagcgccgcgtggacggcctgctggtcgaacggatcaac
ggtgcggccgtgctggaccccggcgctgaccacgccgcggtgtccgccgcgctgaccgcg
gcggggttcagccggacgccgcggggcctgcggctgcgctga

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