Mycobacterium sp. djl-10: BCA37_09745
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Entry
BCA37_09745 CDS
T10620
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myj Mycobacterium sp. djl-10
Pathway
myj03420
Nucleotide excision repair
myj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCA37_09745
03430 Mismatch repair
BCA37_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myj03400
]
BCA37_09745
Enzymes [BR:
myj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCA37_09745
DNA repair and recombination proteins [BR:
myj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCA37_09745
MMR (mismatch excision repair)
Other MMR factors
BCA37_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANW63847
LinkDB
All DBs
Position
1973008..1976268
Genome browser
AA seq
1086 aa
AA seq
DB search
MTIVEARYQPAELAAALGLPQPTDEQAAVIASPPGPLVVIAGAGAGKTETMAARVVWLVA
NGYAHPGQVLGLTFTRKAAGQLLRRVRSRLSRLAGTGLAAVESTDPVTVSTYHAFAGTLL
REHGLLLPVEPDSRLLSETELWQLAYDVVCNHPGELDTTKTPAAVTAMVLRLSGQLAEHL
VSTDQLRDTHVELERLVHTLPAAPYQRDRGPSQWLLRLSDAQTDRAELVPLIEALHRRLR
AEKAMDFGMQMAAAARLAAEFPQVGEQLRQRFRVVLLDEYQDTGHAQRVALSGLFGGGAD
DGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPFADGTPAPTLELRTSWRNPPTTLRVA
NAISEEARRRSVAVRELRARPDADEGTVRCALLSDVEAERDWVADHIAARYRAAADADMP
PPTAAVLVRRNADAAPMAVALRARGVPVEVVGLAGLLAVDEVADVVAMLRLVADPASGAA
AMRVLTGPRWRLGGADIAALWRRARHLVVASASGGEDLTAIVAQLGPDADAASLADAICD
PGAAEEYSDAGYRRICALGDELTALRSHLGYSVSDLVTEVRRMSGIDVEARAVPTGAEMW
SGSEQLDAFADVVDAYAMRGAAGAGNDVAGLLAYLDAAQDVENGLAPAEVTVASDRVQIL
TVHAAKGLEWQVVAVPHLAGRVFPSTAARSTWLTDAGELPPLLRGDRAGLGDHGVPVLDT
SAVTNRKQLSDTVTAHRAQLDQRRIDEERRLLYVAITRAEDTLLLSGHHWGATESKPRGP
SEFLVELKDIIDTAAAADTPCGVVEQWAPAPADGESNPLRDTVIEALWPADPAADRRGAI
EDGAALVQAAMTTDPPAAETKWSAEVDALLAERERTPWQPAAVLPGQLSVSTMVELGRDR
AEALRRLHRRLPVRPDPFALLGTAFHDWVQRFYGAERLFDLADLPGAVDGELAAAEAEQL
ADLQASFMASPWASRTPADVEVPFEMMIGGHVVRGRIDAVFADRDGGITVLDWKTGAPPE
GEQAQRNAAVQLGVYRLAAAALFDVPESEVRAVFHYVRSGHTVAPPLLPGAEELAALISD
DRDASA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtcgaggcgcgctatcagcccgcggaactggcggcggcgctgggacttccg
cagcccaccgacgaacaggccgccgtcatcgcgtcgccgcccggaccgctggtggtgatc
gccggtgcgggggcgggcaaaaccgagaccatggccgctcgcgtggtctggctggtcgcc
aacggatacgcccacccgggccaggtgctcgggctgacgttcacgcgcaaggccgccggc
cagctgctgcggcgggtgcgctcacggctgagccgccttgccggaaccggtttggcggca
gtcgaatccaccgatccggtcaccgtcagcacctaccacgcctttgccgggaccctgctg
cgcgagcacggcttgctgttgccggtggaacccgacagccggctgctctcagagaccgag
ctgtggcagctggcctacgacgtggtgtgcaaccaccccggcgagctggacaccaccaag
actcccgccgccgtcaccgccatggtgctgaggctgtccgggcagctggccgaacacctg
gtcagcaccgaccagctgcgcgacacccacgtcgagctcgagcggttggtgcacaccctg
cccgccgcgccctaccagcgcgaccggggccccagccaatggctgctgcggctgtcggac
gcccagaccgaccgcgccgaactcgtgccgctgatcgaggcgctgcaccggcggctgcgc
gcggagaaggccatggacttcggcatgcagatggctgccgccgcacgattggccgccgag
ttcccgcaggtgggtgagcaactgcggcaacggttccgggtggtcctgctcgacgaatac
caggacaccggacacgcccagcgggtcgcgctgtccgggctgttcggcggcggcgccgac
gacggcctcgccctgacggcggtcggcgacccgatccagtcgatctacggctggcgcggc
gcctcggccaccaacctgccgcggttcaccaccgatttcccgttcgccgacggcaccccg
gcgcccaccctcgaactgcgcaccagctggcgcaacccacccaccaccctgcgggtggcc
aacgccatctccgaggaggcccggcgacgctcggtggcggtgcgggaactgcgggcccga
cccgatgccgacgagggcaccgtgcgctgtgccctgctcagcgacgtcgaggccgaacgc
gactgggtggccgaccacatcgccgcccgctaccgggcggccgccgatgccgacatgcca
ccgcccactgcggcggtcctggtgcggcgcaacgccgatgccgcaccgatggcggttgcg
ctgcgcgctcgcggcgtcccggtggaggtggtcggcctggccgggctgctggccgtcgac
gaggtcgccgacgtggtggcgatgctgcggttggtcgcggacccggcgtcgggggctgcg
gccatgcgggtgctgacgggcccgcgctggcggctgggcggggccgacatcgcggcgctc
tggcgccgcgcccggcacctggtggtggcttcggcttccggcggcgaggacctgaccgcg
atcgtcgcgcagctgggtcctgacgccgacgcggcctccctggccgatgccatctgtgat
cccggcgctgccgaggagtattcggacgccggctaccggcgcatctgcgcgctcggcgac
gagctgaccgccctgcggtcgcacctgggctattcggtgtccgacctggtgaccgaggtg
cgtcggatgtcgggtatcgatgtggaggcccgcgccgtgcccaccggtgccgagatgtgg
tcgggcagcgagcaactggatgccttcgccgatgtggtcgacgcctacgcgatgcggggc
gccgccggcgcaggcaacgacgtcgccgggctgctggcgtacctcgacgccgcccaggac
gtcgagaacggcctggcgccggcagaggtgacggtggccagtgaccgggtgcagatcctc
accgtgcacgctgccaaagggctcgagtggcaggtggtcgcggtgccgcacctggccggg
cgggtgttcccgtccaccgcggcgcgcagcacctggctcaccgatgccggagagttgccg
ccgctgctgcgcggtgaccgggccggcctgggtgaccacggcgtgccggtgctcgacacc
tcggcggtgaccaatcgaaagcagttgtccgacactgtgaccgcgcaccgcgcgcagctc
gatcaacgacggattgatgaagagcgcaggctcctgtacgtggccatcacccgcgccgag
gacacactgctgctctccggtcatcactggggtgccaccgagagcaagccgcgcgggccc
tcggagttcctggtcgagctcaaggacatcatcgacaccgcggccgccgccgatacgccg
tgcggggtggtcgaacagtgggcgccggcacctgctgacggtgagagcaatccattgcgc
gacaccgtgatcgaagccttgtggcccgccgaccccgccgcagaccggcgcggcgccatc
gaggacggggccgcgctggtgcaggccgcgatgaccaccgacccacctgcggctgagacg
aagtggtcggcggaggtggacgcactgctggccgagcgtgagcgcacaccgtggcagccc
gccgccgtcctgcccgggcagctgtcggtcagcacgatggtggagctgggccgcgaccgg
gcggaggcgctgcgtcggctgcatcgccgcctgccggtccgccccgacccttttgcgctg
ctgggcacggcctttcacgactgggtgcagcgcttctacggtgctgagcggttgttcgac
ctggccgatctgcccggcgccgtcgacggtgagctggccgcggccgaggccgaacagctg
gccgatctgcaagcgtcgttcatggcttcaccgtgggcgtcgcgcacccccgccgacgtc
gaggtgccgttcgagatgatgatcggcggccacgtcgtccgcggccgcatcgacgcggtg
ttcgccgaccgcgacggcggaatcacggtgctggactggaaaaccggcgcgccgccggag
ggggagcaggcccagcgcaacgccgccgtgcagctcggcgtctaccggctggcggcagcc
gcgctgttcgacgtgccggagtccgaggtccgggcggtgttccactacgtccgcagcggg
cacaccgtggccccgccgctgctgccgggcgccgaggaactcgccgcgctgatctccgat
gaccgtgatgcgtccgcgtga
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