Mycobacterium sp. djl-10: BCA37_12135
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Entry
BCA37_12135 CDS
T10620
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
myj Mycobacterium sp. djl-10
Pathway
myj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCA37_12135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myj03400
]
BCA37_12135
Enzymes [BR:
myj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BCA37_12135
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BCA37_12135
DNA repair and recombination proteins [BR:
myj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCA37_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANW64241
LinkDB
All DBs
Position
2441199..2442047
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVEVVRRGLQAHVAGKTITAVRVHHPRAVRRHEAGPADLTARLLDNEITGTGRRG
KYLWLTLGSGEALVVHLGMSGQMLLGPVKRAEHLRIAALLDDGTALSFVDQRTFGGWMLT
ELTTVDGTDVPEVVAHIARDPLDPLFDRAGVVEVLRGKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAKVNGARIAEKLTKPTLARILDHARDVMTDALGHGGTSFDSLYVNVNGESGYFD
RSLDAYGREGLPCRRCGAVMRRDKFMNRSSFYCPKCQPRPRG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaggtcgaggtggtccgccggggactgcaggcgcacgtcgccggc
aagaccatcaccgccgtgcgcgtccaccacccccgggcggtgcgccgccacgaggccggc
cccgccgacctgaccgctcgcctgctggacaacgagatcaccgggaccggcaggcgcggc
aagtacctgtggctcaccctcggcagcggcgaggctctggtggtgcacctcgggatgagc
gggcagatgctgctcgggccggtgaaacgagccgagcacctgcgcatcgccgcgctgctg
gatgacggcaccgcgctgagtttcgtggatcagcgcaccttcggcggctggatgctgacc
gagctgaccaccgtcgatggcaccgacgtgcccgaggtggtggcgcacatcgcccgggac
ccgctggacccgctgttcgaccgcgccggtgtggtggaggtgttgcgcggcaagcactcc
gagatcaaacgccagctgctggaccagaccgtggtgtccggcatcggcaacatctacgcc
gacgaggcgctgtggcgggccaaggtcaacggcgcgcgcatcgccgagaagttgaccaag
ccgacgctggcccgcatcctcgaccacgcccgcgatgtgatgaccgacgcgctgggccac
ggtggcacgtccttcgattcgctctatgtgaacgtcaacggcgagtcgggctacttcgac
cggtcactggatgcctacggccgcgagggcctgccgtgccgccgctgcggggcggtgatg
cgccgggacaagttcatgaaccggtcctcgttctactgcccgaaatgccagccccgtccc
cgtggttga
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