Myxococcus sp. SDU36: KGD87_08815
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Entry
KGD87_08815 CDS
T11750
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
myk Myxococcus sp. SDU36
Pathway
myk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
myk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KGD87_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myk03000
]
KGD87_08815
Transcription factors [BR:
myk03000
]
Prokaryotic type
Helix-turn-helix
Other families
KGD87_08815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
GAF
AAA_lid_14
GAF_2
Sigma54_activ_2
HTH_8
GAF_3
AAA_5
HTH_30
HTH_Tnp_IS1
ATPase
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WIG97463
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Position
2268194..2269783
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AA seq
529 aa
AA seq
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MPSGCYGVASAFVLPPLPAMPQAPSDVSQVLLPFGGLVGREVDLDAFLQTLMDRIAITLQ
ADRGTLWLLDPARRELFSRAAHLPEVSQIRVKLGQGVAGTVAEAGHAINVPDPRGEQRFF
ADIDRMTGYRTTSLLAVPLRDGDGTLYGVLQVLNRRGADRFTDEDTQRLTAIASQVGTAL
QSTSLYQELQRAKDQPQVPVGYFFNRIIGESPQLQAIYRLVRKAAPTDATVLLRGESGSG
KELFARAVHVNGPRRDQPFIKVDCAALPAALIENELFGHERGAFTGADHRVPGKFEAASG
GTVFIDELGELPLPVQGKLLRVLQDREFERVGGTQAVKVDVRIVAATHRDLAHMVTEGRF
REDLYYRIKVVEVVLPPLRERGAEDIERLARHFVAAVARRHRLTPPRLSAAALERLKRYR
WPGNVRELENCIESAVVLCEGEILEEHLPLPNVDRAALAPPAAAHGVNAPEAPAPVDAGL
LSLAEVERRHILRVLDAVKGNRTAAARVLEIGRNTLARKLKEYGLGDEP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccctccggatgttatggtgtggcctccgccttcgtccttccgccgttgcccgccatg
ccccaagccccctcggacgtctcccaggtcctcctccccttcggggggctcgttggcagg
gaggtggacctcgacgcgttcctccagacgctgatggaccgcatcgccatcaccctgcag
gcggaccgcggcaccctctggctgctggacccggcccgccgcgagctgttcagccgcgcc
gcgcacctgcccgaggtgtcccagattcgcgtcaagctgggccagggcgtcgccggcacc
gtcgccgaggcgggccacgccatcaacgtgccggacccgcgcggcgagcagcgcttcttc
gcggacatcgaccggatgacgggctaccgcaccaccagcctgctcgcggtgccgctgcgc
gacggggacggcaccctctacggcgtgctccaggtcctcaaccgccgcggcgcggaccgc
ttcaccgatgaggacacgcagcggctcaccgccatcgcctcgcaggtgggcaccgccctc
cagagcaccagcctctatcaggagctccagcgcgcgaaggaccagccccaggtgccggtg
ggctacttcttcaaccgcatcatcggcgagtccccgcagctccaggccatctaccgcctg
gtgcgcaaggccgcgcccaccgacgcgacggtgctgctgcgcggcgagagcggcagcggc
aaggagctgttcgcccgcgccgtccatgtgaatggcccccgcagggaccagcccttcatc
aaggtggactgcgcggcgctgcccgccgcgctcatcgaaaacgagctcttcggccacgag
cgcggcgccttcaccggcgcggatcaccgcgtgcccggcaagttcgaggcggccagcggc
ggcacggtgttcatcgacgagcttggcgagctgcccctgcccgtgcagggcaagctgctg
agggtcctccaggaccgtgagttcgagcgcgtgggcggcacccaggccgtgaaggtggac
gtgcgcatcgtcgccgccacccaccgggacctggcccacatggtgaccgagggccgcttc
cgcgaggacctctactaccgcatcaaggtcgtcgaagtggtgctgccgccgctgcgggag
cgcggcgcggaggacatcgagcggctcgcccgccacttcgtcgccgccgtcgcccggagg
caccggctgacgccgccccgcctcagcgccgccgcgttggagcggctcaagcgctaccgc
tggcccggcaacgtgcgggagctggagaactgcatcgagagcgccgtggtgctctgcgaa
ggggagattctcgaagagcacctgcccctgcccaacgtcgaccgggccgccctggcgcct
ccagccgccgcccacggtgtcaacgcgccggaggcccccgcgcccgtggatgcgggcctg
ctgtcgctggcggaggtcgaacgccgccacatcctgcgcgtgctggacgccgtgaagggc
aaccgcaccgccgcggcacgcgtgctggagattggccgcaacacgctcgcacgcaagctc
aaggagtacggcctgggcgacgagccctga
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