Myxococcus sp. SDU36: KGD87_12500
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Entry
KGD87_12500 CDS
T11750
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
myk Myxococcus sp. SDU36
Brite
KEGG Orthology (KO) [BR:
myk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myk03009
]
KGD87_12500
Enzymes [BR:
myk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
KGD87_12500
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
KGD87_12500
Ribosome biogenesis [BR:
myk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KGD87_12500
23S rRNA modification factors
KGD87_12500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
SYY_C-terminal
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
WIG98127
LinkDB
All DBs
Position
complement(3261901..3262641)
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AA seq
246 aa
AA seq
DB search
MKPRKERVDVLVVERGLAESRTKAQALILAGQVVVDDQRVDKPGTLIPQEAELRLKGEVM
PYVSRGGLKLKGAIDRFGLDVRGKVAADIGASTGGFTDCLLQHGAPRVHAIDVGYGQLHE
KLRTDPRVRSRERVNARYLTEEDLPEKVGVVVIDVSFISLTQVLPSVLTYLEPGGLLVAL
VKPQFEVGPDRVGKGGVVRDVAARQGAIDTVTAFVREQGLEVLGLMDSTVPGPAGNVEAL
LVASRP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctcgcaaggagcgggtggacgtgctggtggtggagcgcgggctggccgagtcg
cgcaccaaggcccaggcgctcatcctggccgggcaggtcgtggtggatgaccagcgcgtg
gacaagcctgggacgctgattccgcaggaggcggagctgcgcctcaagggcgaggtgatg
ccctacgtgtcgcgcggcggcttgaagctgaagggcgccattgaccgcttcgggctggac
gtccggggcaaggtggccgcggacatcggtgccagcaccggcggcttcacggactgcctg
ctccagcacggggccccgcgcgtccatgcgattgacgtgggctacggacagctccacgag
aagctgcgcacggacccacgggtgcgctcgcgcgagcgcgtcaacgcgcgctacctcacg
gaggaggacctgccggagaaggtcggcgtggtcgtcatcgacgtgagcttcatctccctg
acgcaggtgctgccgtcggtgctgacgtacctggagccgggcggcctgttggtggcgctg
gtgaagccccagttcgaggtggggccggaccgggtggggaagggcggcgtggtgcgggat
gtcgccgcccggcagggcgccatcgacaccgtgacggcgttcgtccgcgagcagggcctg
gaggtgctcgggttgatggactccacggtgcccgggcccgctggcaacgtggaggcgctc
ctcgtcgccagcaggccctga
DBGET
integrated database retrieval system
