KEGG   Myxococcus sp. SDU36: KGD87_24180
Entry
KGD87_24180       CDS       T11750                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
myk  Myxococcus sp. SDU36
Brite
KEGG Orthology (KO) [BR:myk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:myk02048]
    KGD87_24180 (cas8c)
Prokaryotic defense system [BR:myk02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    KGD87_24180 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: WIG93666
LinkDB
Position
complement(6022080..6023825)
AA seq 581 aa
MMLTALNDFARERGLTDDLLYEVKPVDFFIRISAAGKFVTLESTAGEDGRGKPLSIPRLP
QRAANIAAGFFADNPKYVLAYEKGTPKTKAGGVEKRVARLEAFLKPVREVAAETKDPEAR
AVEAFLSNEAERSKVLAARDAEEWTGSELLAFVVGEATVPVHQNPAIRACWERRSGEKRA
LGRTARCLVTGLEGVVAVTHPKLKNVPEAQPAGASLVSFNAPAFSSHGLEQGDNAPVSQE
AALGYVLALNDMLRGTEQRRFRQGIQLGDGSVLVFWTRASASEESLLLSWMDPTEEDLQR
FAESPLQGLEPGELDDRAFYAVTLAGNAGRVAVRDWFESRVGEVKQNIRRYFDDLRIGQA
PAKPIPVYRLLKAVEAPSGRGLSPDVATRMLGAALRGQPFPRQLLTSALDRLRLPPSDDR
FEREQLRLRVALIKATLLRLPRSGTTPLEVSVSLDKNNASQPYVLGRLFAVLERLQGAAL
KDLNATIRDRYFGAASRNPVTVFPRLLQLSVHHASKAAENGRWLERTKGEVMSLLPSQRP
FPPVLDLEAQGLFAVGYYHQREAFFTKREAPAPGEPDASIS
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgatgctgacggcactgaacgacttcgcccgtgagcgcgggctcacggatgacctgttg
tacgaggtcaagcccgtggacttcttcatccgcatcagcgcggcggggaagttcgtcacg
ctggagagcaccgcgggagaggacgggaggggaaagcccctctcgattccccggctgccg
cagcgggcagcaaacatcgcggcgggcttcttcgcggacaatccgaagtacgtcctcgcc
tacgagaagggcacgcccaagacaaaggctggaggcgtggagaagcgcgtagcccggctg
gaggccttcctgaagccggttcgggaggtcgccgcggagacgaaggacccggaggcccgg
gccgtggaggccttcctttcgaacgaggccgagcggagcaaggtgctggcggctcgcgac
gcggaggaatggacgggctccgagctgctcgccttcgtcgtcggtgaggccaccgtgccc
gtgcatcagaacccggccattcgcgcctgctgggagcggcgctccggagagaagcgcgcg
ctggggcggacggcgcggtgcctggtgacaggactggagggggtggtggccgtcacccat
cccaagctgaagaacgtcccggaggctcagccggcgggcgcttcactggtctccttcaac
gcgcccgcgttctcgtcgcacgggctggagcagggggacaacgcccccgtctcccaggag
gcggcgctgggctacgtgctggcgctcaacgacatgctccgtgggacggagcagcgccgc
ttccggcagggcattcaattgggggacggctcggtgctcgtgttctggacgcgcgcgtcc
gcgtctgaagagagcctcctgctgtcgtggatggacccgacagaggaggacctccagcgc
ttcgcggagtcgccgctgcagggtctggagcccggcgagctggatgaccgcgccttctac
gccgtcacgctggcgggcaacgcgggccgcgtcgccgtgcgtgactggttcgagtcgcgc
gtgggcgaggtgaagcagaacatccggcgctacttcgatgacctgcgcatcgggcaggcg
ccggcgaagccaatccccgtctatcgcctgctcaaggccgtggaggcgccctcggggcgt
ggcctgtcgccggacgtcgccacgcggatgctgggcgcggcgctgcgaggacagcccttc
ccgcgccaactcctgacgtccgcgctggaccgactgcggctgcctccctccgacgaccga
ttcgagcgcgaacaactgcggctccgcgtcgcgctcatcaaagccaccctgctgcgactc
cctcgaagtggaaccactcccctggaggtctccgtgtcattggacaagaacaacgcctcg
cagccctatgtgctcggccgcctcttcgccgtgctggagcggttgcaaggcgcggcgctg
aaggacctcaacgccaccatccgcgaccgctacttcggcgccgcgtctcgcaaccccgtc
accgtcttcccccggttgcttcagctctccgtccaccacgcctccaaggcggcggagaac
ggcaggtggctggagcggacgaagggagaggtgatgtcactgcttccttcgcagcggcca
ttccctcccgtgcttgacctggaagcgcagggcctcttcgccgtcggctactaccaccaa
cgcgaggcgttcttcaccaagcgcgaggcgccggctcctggcgagcccgacgcgtccatc
tcctga

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