Mycetocola zhujimingii: C3E77_04230
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Entry
C3E77_04230 CDS
T05409
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
myl
Mycetocola zhujimingii
Pathway
myl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3E77_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myl03021
]
C3E77_04230
03019 Messenger RNA biogenesis [BR:
myl03019
]
C3E77_04230
Transcription machinery [BR:
myl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C3E77_04230
Messenger RNA biogenesis [BR:
myl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C3E77_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_22
ARMET_C
NACHT
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
AWB85896
UniProt:
A0A2U1TEU3
LinkDB
All DBs
Position
910784..913138
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AA seq
784 aa
AA seq
DB search
MTNVNIRLDTESGANLSSLKVSDLQLLASQWGVQGASKLRKGELVERIAEAQAAAAPEAN
GEAQAAPAASAEQATETQVPAPDAVVAQDSPVVAPAVTEATPVEEPTAPVARKRAPRRAS
TGATKAGERVQAAGHVNSDGAPLIPDAPVADTAAVAPVEAPQSAQGESAPVEAEATDSQA
TDAQATDAQAADGQAEGRESGSQRSGRKNNRRGRGSKADRAENTDRAENATVDTDADAAS
ADDADTDSSQGDSSQGERQGRGRGRGRGRGGDNANRDDDRAGNDRNGNERNERNGNDRNG
DKNADRGGNDRNADRNDRDRNADRNDRDRNDKNNERNERNADRAPASDRQDSDRNAGNRQ
LERDDEGGRNGRNRYRDRKRRGGTDSADFEPEIADDDVLLPVAGILDVLDNYAFVRTTGY
LPGSNDVYVSLGQVKKYNLRKGDAVVGAIRQPRENDSNARQKYNAIVKVESVNGQSVEEA
ANRVEFGKLTPLYPQERLRLETEQGKLTQRIIDLIAPIGKGQRGLIVAPPKAGKTIVLQQ
IANAISINNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERA
KRLVELGHDVVVLLDSITRLGRAYNLAAPTSGRILSGGVDASALYPPKRFFGAARNIENG
GSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEM
LLGADEVKVTWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLVQMQKTMPQPVSGSGHD
RDHR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgactaacgtcaacatccgtctcgatacggaatcaggcgcaaacctctcgtccctcaag
gtctctgacctgcagctgcttgccagccaatggggcgttcagggcgcatccaaacttcgc
aagggagaactcgtggagagaatcgccgaggctcaggccgcagccgctcccgaggcaaac
ggcgaggctcaggccgctccggccgcctcggcggagcaggccaccgaaacccaggtcccc
gcgccggacgcagttgtcgcgcaggactcaccggtcgtcgctcccgctgtgacggaggca
actccggttgaggagccgacagctcccgtcgccaggaagcgcgcaccgcgtcgtgcctcc
accggtgccaccaaagcaggcgagcgcgttcaggccgctggacacgtgaactctgacggt
gcaccactcattccggatgctccggtggcggacaccgccgctgtcgctccggtggaagca
ccgcaatcggcccagggcgagtcagctcccgtcgaggcagaggcgaccgattcgcaggca
actgatgcacaggcaactgatgcacaggcagccgacggacaggcagagggccgcgagagc
ggatcccagcgttccggccgtaagaacaacaggcgcggacgcggcagcaaggccgaccgt
gccgagaacaccgaccgtgccgagaacgccacggtcgacaccgacgctgacgcggcatcc
gctgatgacgctgacaccgattcttcgcagggcgattcgtcgcagggcgagcgccagggc
cgcggccgtggccgtggccgtggacgcggtggcgacaacgccaaccgcgatgacgaccgc
gcaggcaacgaccgtaatggcaacgagcgcaacgagcgtaacggtaacgaccgcaacggc
gacaagaacgctgatcgcggtggcaacgaccggaacgctgatcgtaacgaccgcgaccgg
aacgccgatcgcaacgaccgcgaccgcaacgacaagaacaacgagcgtaacgagcgcaac
gcggatcgcgcgccggcctccgatcgccaggattccgaccgcaacgcgggcaaccgccag
ctcgagcgcgatgacgagggtggccgtaacggccgcaaccgttaccgcgaccgcaagcgc
cgcggtggaaccgactcggccgacttcgagcccgagatcgccgacgacgacgtgctcctg
cccgtcgccggaatcctcgacgttctcgacaactacgccttcgtccgcacgaccggctac
ctgcccggttcgaacgacgtgtacgtttcgcttggccaggtcaagaagtacaacctgcgc
aagggtgacgccgttgtcggtgcgatccgccagccgcgcgagaacgacagcaacgcgcgc
cagaagtacaacgcaatcgtcaaggttgagtcggtcaacggccagagtgtcgaagaggcg
gcgaaccgtgtcgagttcggcaagctcacgccgctctacccgcaggagcgtctccgtctc
gagaccgagcagggcaagctcacgcagcgcatcatcgacctgatcgctccgatcggcaag
ggacagcgtggactcatcgtcgcgccgcccaaggcaggcaagacgatcgtgcttcagcag
atcgccaacgccatctcgatcaacaacccagaggttcacctcatggttgttctcgtcgac
gagcgtcccgaagaggtcaccgacatgcagcgcacggtgaagggtgaggtcatcgcctcc
accttcgaccgcccagctgaagaccacacgacggtcgccgaactcgccatcgagcgcgcc
aagcgtctcgtcgaactcggccacgacgtcgttgtgctcctcgactcgatcacccgcctc
ggacgcgcgtacaacctcgctgcaccgacctccggccggatcctctccggtggagtcgac
gcatcagccctgtacccgccgaagcggttcttcggagccgcgcgcaacatcgagaacggt
ggctcgctcaccattctcgcgacggcgctcgtcgagaccgggtccaagatggacgaggtc
atcttcgaagagttcaagggcaccggaaactccgagcttcgcctgtcgcgccagctggcc
gacaagcgcatcttcccggccgtcgacgtcaacgcgtcgtccacccgccgtgaagaaatg
ctgctcggtgcagacgaagtcaaggtcacctggaagctgcgtcgtgccctcgccggcctc
gacccgcagcaggcactcgaggtcgtcctcggcaagctcaaggaaacctcgtcgaacgtc
gaattcctcgttcagatgcagaagacaatgccccagccggtttccggttcgggtcacgac
cgcgatcaccgctag
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