Mycetocola zhujimingii: C3E77_07075
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Entry
C3E77_07075 CDS
T05409
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
myl
Mycetocola zhujimingii
Pathway
myl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3E77_07075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myl03400
]
C3E77_07075
DNA repair and recombination proteins [BR:
myl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3E77_07075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3E77_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
AAA_25
AAA_23
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AWB86398
UniProt:
A0A2U1TGF7
LinkDB
All DBs
Position
complement(1491565..1494456)
Genome browser
AA seq
963 aa
AA seq
DB search
MSISKVNSTSKLSVRGARVHNLRNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYMRLLW
ARVGVPHCPQCGEPIQRQTVQQIADQLMELETGTRYMVMSPVVSQKKGEFVDLFKELAAS
GYARAVVDGEQVQLSEPPTLKKSYKHDISVVVDRLVAGPDALSRLTDSLETALRLTDGLV
EIKLVDEEGPDAVRTFSEKLSCPNNHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
ADLLIGDPSLSIDEGVIIPWTTQGKGLYQYYEKLLDGLSRDLDFSLRTPWADLPKKVQEA
VLRGENFKVKVKWKNRYGREVSYTSGFEGVMPYIERQYAQAETDVQRARWGEYLREIPCP
VCNGQRLKPEVLSVLIHGTNIAEVAELSLTDARAFMDQMELTARESAIAAQVLREIKLRL
DFLIQVGLNYLNLSRTAGSLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLVTLRDLGNTLIVVEHDEDTIRTADWVVDIGPGAGVNGGRVVHSGSYEDLLENPESL
TGDYLAGRREIPIPETRRPVDPERLISVVGAEANNLRKVNVDFPLGTFTAVTGVSGSGKS
SLVNDILYRVLANKLNGARKVPGKHTRVTGLDQLDKVIHVDQAPIGRTPRSNPATYTGVF
DRIRTLFSETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
ARYNRETLSVHYKGKNIAEVLDMPIAEAAEFFEAITSIHRFLKTLVEVGLGYVRLGQSAT
TLSGGEAQRVKLATELQKRTNGRSIYVLDEPTTGLHFEDVRKLLLVLNSLVDKGNTVIVI
EHNLDVIKSADWIIDIGPEGGAGGGRVLATGTPEKIAKVKKSHTGFYLNEVLEAEQVQAR
KAG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatatcgaaggtaaattcaacgtcaaaactcagcgtgcgaggcgcacgcgtccac
aacctgcgcaacgtggatcttgacatcccgcgcgattctctcgtggtattcaccggcctc
tccggctcgggcaagtcgtcgctcgcattcgacacgatctttgccgagggccagcggaga
tacgtcgagtcgctctcggcgtacgcgcgtcagttcctcggccaggtagatcgacccgac
gtcgatttcatcgagggcctgagccccgccgtgtcgatcgaccagaagtctacgaaccgc
aacccgcgctcgaccgtcggcacgatcaccgaggtctacgactacatgcgcctcctgtgg
gcgcgagtcggagttccgcactgcccccagtgtggcgagccgatccaacggcagaccgtt
cagcagatcgccgaccagctcatggagctcgagaccggcacgcgttacatggtgatgagc
cccgtggtctcgcagaagaagggcgagttcgtcgacctcttcaaggaactggcagcgagc
ggctacgcccgcgccgtcgtcgacggcgagcaggttcagctctcggagcccccaacactc
aagaagtcgtacaagcacgacatctcggtcgtcgtcgaccgtctcgtcgccggccctgac
gccctcagccgactgaccgattcgctcgagaccgcgctgcgcctcaccgacgggctcgta
gagatcaagctcgtcgacgaagaaggaccagacgcggttcgcaccttcagcgagaagctg
tcgtgcccgaacaaccacccgatccagctcaccgagatcgagccgcgcacgttcagcttc
aacgctccgttcggagcatgccccgagtgctccggcctcggcactcggatgtccgtcgac
gccgacctcctcatcggcgacccgagcctcagcatcgacgagggtgtcatcatcccgtgg
accacgcagggcaagggcctttaccagtactacgagaagctgctcgacgggctttcccgc
gacctcgatttctccctgcggacgccatgggctgaccttccgaagaaggtccaggaggct
gtcctccgcggcgagaacttcaaggtcaaggtcaagtggaagaaccgttacggccgcgag
gtcagttacacctcgggcttcgaaggggtgatgccgtacatcgagcgccagtacgcccag
gccgaaaccgatgtgcagcgcgccaggtggggcgagtacctccgggagattccgtgcccc
gtgtgcaacggccagcgcctcaagcccgaagtcctctccgtcctcatccacggcaccaac
atcgctgaggtcgccgagctcagcctcaccgatgcccgcgccttcatggaccagatggaa
ctgaccgcccgcgagtccgcgatcgcggcccaggtgctgcgcgagatcaaactgcggctg
gactttttgattcaggtcggcctcaactacctcaacctgtcacgaaccgccggatcactc
tccggcggcgaagcacagcgcatccgtcttgccacccaaatcggatccggcctcaccggt
gtgctgtacgttctcgacgaaccgagcatcggtctgcaccagcgtgacaaccgccggctg
atcgagacgctcgtcaccctccgcgacctcggaaacacgctcatcgttgtcgaacacgac
gaagacacgatccgcacggctgactgggtcgtcgacatcggaccaggtgccggcgtcaac
ggcggtcgcgtcgtccactccgggtcgtacgaagacctgctcgagaaccccgaatcgctg
accggtgactacctcgccggacgccgcgagatcccgattcccgagacgaggcgcccggtc
gaccccgagcggcttatctcggtcgtcggtgcagaggcgaacaacctccgcaaggtcaac
gtcgatttcccgctcggcaccttcacggcggtcaccggcgtgagcggctccggcaaatcg
tccctcgtcaacgacatcctgtaccgggttctcgcgaacaaactcaacggtgcacgcaag
gtacccgggaagcacacgcgcgtcacggggctcgaccagctcgacaaggtgatccacgtc
gaccaggcgccgatcggtcgcacaccgcggtccaacccggcgacctacaccggcgtgttc
gatcgcatccgcaccctgttctccgaaaccaccgaggcgaaggcgcgcggctacctgccc
ggccggttcagcttcaacgtcaagggcggccgctgcgaggcgtgctccggtgacggcacg
atcaagatcgagatgaacttcctgcccgatgtttacgtcgcctgtgaggtctgcggggga
gcgcggtacaaccgcgaaaccctgtcggtgcactacaagggcaagaacatcgccgaggta
ctcgacatgccgatcgcggaggccgctgagttcttcgaggccatcacctcgatccaccgt
ttcctcaagaccctcgtcgaggtcggactcggctacgtccggctcggccagagcgcgacg
acgctgtccggtggagaagcgcagcgcgtgaagctggcgaccgagctgcagaaacgcaca
aacggcaggagcatctacgtcctcgacgagccaacgacaggcttgcacttcgaagacgtg
cggaagctcctcctcgtactgaacagcctcgtcgacaagggcaacaccgtcatcgtcatc
gagcacaacctcgacgtgatcaagtctgccgactggatcatcgacatcggccccgagggt
ggcgccggcggcgggcgtgtgctcgcgacaggcacccccgagaagatcgcgaaggtcaag
aagagccacacggggttctacctcaacgaagtactcgaggccgaacaggttcaggcgcgt
aaggccggatag
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