Mycetocola zhujimingii: C3E77_10730
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Entry
C3E77_10730 CDS
T05409
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
myl
Mycetocola zhujimingii
Pathway
myl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C3E77_10730
09124 Replication and repair
03420 Nucleotide excision repair
C3E77_10730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myl03021
]
C3E77_10730
03400 DNA repair and recombination proteins [BR:
myl03400
]
C3E77_10730
Enzymes [BR:
myl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E77_10730
Transcription machinery [BR:
myl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C3E77_10730
DNA repair and recombination proteins [BR:
myl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C3E77_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWB87043
UniProt:
A0A2U1TDR9
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All DBs
Position
2245744..2247384
Genome browser
AA seq
546 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVAHPLAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HDSSDMLATLEKYSKFAIPQTVSLDIAETVSRYGRLIIERNDDKQLVLRSTDEAVLTEIA
GAKRIAPLLIGHPSPDTYLVDAWARGQLKQELVKLGWPAEDLAGYTPGTPHRIDLREEDW
HLRGYQQKAIDNFFEGGSGVVVLPCGAGKTLVGAGAMATAKTNTLILVTNTVSARQWRDE
LLRRTSLTEEEIGEYSGQVKEVKPVTIATYQILTAKRKGEYAHLALLDAMDWGLVVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGYISP
ASCYEVRIDLPQSERLTYAAAADDDRYRLAATAPAKLDVVRDLVARHEGERILVIGQYLD
QIDELAEELGAPKLTGSTPVDERERLFQAFRTGEITVLVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKESGLSANFYTLVARDTVDQDFAQNRQRFLAEQGYSYTILD
AGTLAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggcccactgatcgtccagagcgaccgcacggttctcctcgaggttgcccac
ccgctcgccgaggatgcacgtcacgacctggcggtctttgcagaactcgaacgcgcccca
gagcacatccacacctaccggatcacccggttggggctgtggaacgcccgcgccgccggg
catgactcgtcggacatgctcgcgactctcgaaaagtactcgaaattcgccattccccag
accgtatcgctcgatatcgccgagaccgtgtcgcgctacggacggctcatcatcgagcgc
aacgacgacaagcaactggtgcttcgctcgacggacgaggcggttctgactgagatcgcc
ggcgcgaaacggatcgcaccgctgctcatcgggcatccgtctcccgatacgtatctcgtc
gacgcctgggcacgtggccaactcaagcaggagttggtaaagctcggctggcccgccgaa
gacctcgcggggtacacccccggcacaccccaccggatcgacctccgcgaggaggactgg
cacctccgcgggtaccagcagaaggccatcgataatttcttcgagggcggctccggagtc
gtcgtgctcccgtgcggcgcaggaaagacactggtcggtgccggtgccatggcaaccgct
aagacgaacaccctcatcctcgtgacgaacacggtatctgcgcggcagtggagggacgaa
ctcctccggcgcacaagcctgaccgaagaggagatcggcgagtactcaggccaggttaaa
gaggtcaaaccggtgacgatcgccacgtaccagatcctcaccgccaagcgaaagggtgag
tacgcccacctcgcgctcctcgatgccatggactggggactcgtcgtctacgacgaggtc
catctcctgcccgccccggtgttcaagctcaccgccgaactccaggcgcgccgccgactc
ggcctcacggcgacgctggttcgagaggacggcagggaaggcgacgtgttcagcctcatc
ggtcccaagcggttcgatgcgccctggaaggagatcgaagcccagggctacatctcgccg
gcgagctgctacgaggttcggatcgacctcccccagtccgagcgactgacgtacgccgct
gcggccgacgacgaccggtaccgtctcgctgcgacggcaccggcaaaactcgacgtcgtc
cgtgatctcgtcgcgcgacacgagggggaacgcatcctcgtcatcggccagtacctcgac
cagatcgacgaacttgccgaggagcttggcgcccccaaactgaccgggtcaacaccggtc
gacgaacgcgagcggctgttccaggcgttccgcacaggagaaataaccgttctcgtggtg
tcgaaggtggccaacttctctgttgacctccccgaagcgaccgtagcgatccaggtgtcg
ggatcattcgggtcgcggcaggaagaagcccagcggctcggccggcttctccgccccaag
gaatcggggctttcggccaatttctacacgctcgtcgcgcgcgacacggtggaccaggac
ttcgcacagaaccggcagcggttcctcgccgagcagggatacagctacacgattctcgac
gctggcaccctcgctgcctga
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