Myxococcus hansupus: A176_000187
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Entry
A176_000187 CDS
T04077
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mym
Myxococcus hansupus
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_000187
Enzymes [BR:
mym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A176_000187
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A176_000187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
T2SSE
AAA_25
AAA_30
NACHT
nSTAND3
FtsK_SpoIIIE
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AKQ63275
UniProt:
A0A0H4WPL0
LinkDB
All DBs
Position
213329..216958
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AA seq
1209 aa
AA seq
DB search
MEDITAAISAHQVVIVAGATGSGKTTQLPKILLAMGRGRPRQIGVTQPRRIAATSVAARV
AREVGTELGTDVGYQIRFEDRSTRQTAVKFMTDGVLLAQIHSDPLLRRYDTIVLDEAHER
SLTIDFLLGWLKRILPRRPDLKVVVSSATIETERFSQFFGGAPVIQVEGRTFPVDVLYEP
PPEDTELADSVADAVANVLSLDPDGDVLVFLPGEREIREAENALNARELRGTVVQPLYAR
LSASEQSRVFATIPERRVILATNVAETSVTIPGIVYVVDTGVARLSRYDPRSGTTRLHIE
PVSQASADQRKGRCGRVREGICVRLYDEVSFTTRSAFTDPEIKRTGLAGVILRMKSLGLG
DVEDFPFLDPPQPRAIAEGWRVLEELGAIEGKERTLTPLGHQLARFPVDPRIARMILAGA
EYGCLDEVLIVAAALNLQDPRERPRELAQKADELHRRFRDEHSDFTGLLKLWAFVREAEG
RGTSHLRRVCRDNFLSFLRVREWRDVQRQLEETVRELRLSRKGRGVPAKGDVLHQALLTG
LLSRIGQWNPEQRYFTGAKQTRFMVHPSSALAKKPPAWVMAFELVETSQLFARTVAKLDP
EWLAAAAPHLLKRSYSEPYWSEKSARAMVKENATLFGLQVFKERPVILAGMDPAQARLMF
LEHALVRGEYRTRGAFQEKNRQVLERVARLRDKARRSELLDSEALLTFFDQRVPADVTDG
AGFEVWRRKAEAADPHVLVLSMEDALSHDPDLSPAHYPDAIALHGASVPVTYTFDPSAED
DGITLSVPLLLLAQLVPGELDWTIPGWQREKLTALLEQLPRAQRKQLGPLPDLVDTLEKE
LVPFRGPLIPALARAVSRLCGVDVTEASFRADAVVPYLRITLRVLDERGKELARSRDADA
LLKQHGGHARAALRSVAPTSDWERKGLTAWSFGELPSVVTRRVGGLDVRSYPALVDRGAT
VDLVLLETAPAAETATRTGVRRLLMLAARGHVAVSAARMPLPFPSLDGAPPARGQADAFR
ALVLARGVDEAFKLAPGAPLPRTKAAFDALVREGSPRIEQAARDWANAVVVTTAELSATL
AALKTASKGPSGSAAVKDIRAQLGHLFPANLIEWIPFARLMHYPRYLRAVQARLSRAVMN
PAKDAGKAAPFTPLWETFLARRATVRDQAAAEELRWSFEELRVAIFAPEVTTPVSVTVAK
VGAALTALR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtggaggacatcaccgcggccatttctgcccatcaggtggtcatcgtcgcgggggcgacc
ggctcggggaagacgacgcagttgccgaaaatcctgctcgccatggggcgaggccggccg
cgccagattggcgtcacccagccacggcgcatcgccgcgacgagcgtggcggcgcgcgtg
gcccgcgaggtgggcacggagctgggcacggacgttggctaccagattcgcttcgaggac
cgctcgacccggcagaccgccgtgaagttcatgaccgacggtgtcctgctcgcgcagatt
cacagcgacccgctgctgcgccgctacgacacgattgtgctcgacgaggcccacgagcgc
agcctcaccatcgacttcctgctcgggtggctcaagcgcatccttcccaggcgccccgac
ctcaaggtggtggtgagttcggccaccatcgagaccgagcgcttctcgcagttcttcgga
ggggctccggtcatccaggtggagggccggacctttccggtggacgtgctctacgagccg
ccccccgaggacaccgagcttgctgactccgtcgccgatgcggtggcgaacgtgctctcg
ctcgacccggacggcgacgtcctcgtgttcctccccggggagcgggagattcgcgaggcc
gagaacgcgctgaacgcgcgcgagctgcgcggcacggtggtgcagcccctgtacgcgcgc
ctgtcggcctccgagcagtcgcgcgtcttcgccaccatccccgagcgccgggtcatcctc
gccaccaacgtcgcggagacgtccgtcaccatcccgggcatcgtgtacgtcgtggacacg
ggggtggcgcgcctgtcgcgctacgacccccgctcgggcaccacgcgcctgcacatcgag
ccggtctcccaggccagcgccgaccagcgcaaggggcgctgcgggcgcgtgcgcgaggga
atctgcgtgcgcctctacgacgaggtgagcttcaccacgcggtccgccttcaccgacccg
gaaatcaagcgcaccgggctcgcgggggtcatcctgcggatgaagtcgctcggcctcggt
gacgtcgaggacttccccttcctcgacccgccccagccgagggccatcgccgagggctgg
cgggtgctcgaggagctgggggccatcgagggcaaggagcgcaccttgacgccgctcggg
catcagctcgcgcgcttcccggtggacccgcgcatcgcgcggatgattctcgccggcgcc
gagtacgggtgtctggacgaggtgctcatcgtcgccgcggcgctcaacctccaggacccg
cgcgagcggccacgggagctcgcgcagaaggcggacgagctgcaccggcgcttccgtgac
gagcactcggacttcacggggctcctcaagttgtgggcattcgtgcgcgaagccgagggc
cgggggacgtcccatctgcggcgcgtgtgccgcgacaacttcctgtccttcctgcgggtg
cgcgagtggcgggacgtccagcgtcagctcgaggagaccgttcgcgagctgcgcctgtcg
cgcaagggccggggcgttccggcgaaaggggacgtcctgcaccaggcgctcctcaccggg
ctcctgtcccgcatcggccagtggaatccggagcagcgctacttcacgggcgcgaagcag
acgcgcttcatggttcacccctcgtcggcgctcgcgaagaagcccccggcctgggtgatg
gcgttcgagctggtggagacgtcccagttgttcgcgcgcaccgtggcgaagctcgacccg
gagtggctcgcggcggcggccccccacctgctcaagcgcagctactccgaaccgtactgg
tcggagaagtccgcgcgcgccatggtgaaggagaacgcgaccctcttcgggctccaggtc
ttcaaggagcgccccgtgattctggccggcatggaccccgcccaggcacggctgatgttc
ctcgagcatgccctggtgcgcggcgagtaccgcacccggggggcgttccaggagaagaac
cgccaggtgctcgaacgcgtggcgcgcctgcgggacaaggcccggcgcagcgagctgctc
gacagcgaggcgctgctgacgttcttcgaccagcgcgtcccggcggacgtgacggacgga
gcgggcttcgaggtctggcgccgcaaggccgaggcggccgacccccacgtgctcgtcctc
tccatggaggatgccctctcgcacgacccggacctgtccccggcgcactacccggacgcc
atcgccctgcacggcgcgtccgtgccggtgacgtacaccttcgacccctcggccgaggac
gacggcatcaccctgagcgtgccgctgctgctgctcgcccagttggtcccgggggagctc
gactggaccatccccgggtggcagcgggagaagctcaccgcgctgctcgaacagcttccc
cgcgcccagcgcaagcagctagggccgttgccggacctggtcgacacgctcgaaaaggag
ctcgtgcccttccgcgggccgctgattccagcgctcgcgcgcgcggtgtcccgcctgtgc
ggcgtggacgtgaccgaggcgtcgttccgggccgatgccgtggtgccttacctgcgcatc
acgctccgggtgctcgacgagcggggaaaggaactcgcgcggagccgcgacgccgacgcg
ctgctcaagcagcacggtggacatgcccgggcggcgctgcgcagcgtggcgccgacgtcg
gactgggagcgcaaggggctgaccgcctggagcttcggtgagctgccctccgtggtcacc
cggcgggtcggcgggctcgacgtccgcagttatcccgcgctggtcgaccggggcgccacc
gtggacctggtgctgcttgaaacagcccccgccgccgagacggccacgcgcaccggggtc
cgccggctcctgatgctcgccgcgcgcgggcatgtggctgtcagcgccgcgcgcatgccg
cttccatttccgtcgctggatggcgcgccgcccgcgcggggccaggccgacgccttccgg
gcgctcgtcctcgcacgcggcgtcgacgaggcgttcaagctcgcgccgggtgcgccactg
ccccgcacgaaggcggccttcgatgcgctggtccgagagggctcaccgcgcatcgagcag
gcagctcgggactgggcgaacgccgtcgttgtcaccaccgcggagctctccgcgacgctc
gccgcactcaagacggcatccaaggggccgagcggctcggcggccgtgaaagacatccgc
gcgcagctcgggcacctgttccccgcgaacctcatcgagtggattcccttcgcgcgcctg
atgcactacccgcgctatctccgcgcggtgcaggcccggctgtcgcgtgcggtgatgaac
cccgccaaggacgcagggaaggccgcgcccttcaccccgctgtgggagaccttcctcgcc
aggcgcgccaccgtgcgtgaccaggcggcggcggaggagctgcggtggtccttcgaggag
cttcgcgtggccatcttcgctccggaggtgacgacgcccgtgtcggtgacggtggcgaag
gtcggcgcggccctcacggcgctgcgctag
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