Pseudomyxococcus hansupus: A176_000916
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Entry
A176_000916 CDS
T04077
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mym
Pseudomyxococcus hansupus
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mym03016
]
A176_000916
Enzymes [BR:
mym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A176_000916
Transfer RNA biogenesis [BR:
mym03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A176_000916
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AKQ64004
UniProt:
A0A0H4WMN7
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All DBs
Position
complement(1058793..1059929)
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AA seq
378 aa
AA seq
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MDAEGEERATRQLEQAREIAVDLEADSMHAFRARLCFLQLATDAEVFLLDTLQPGVVPDM
LAPLMADPARTKFFHAAQGDLQFLAEVGVRVQGLFDTHRAATLLGWPKVGLADLARERLG
VELPKEHQQSDFSIRPLPPGMREYIANDVRYLCELGRQVRDACREADILEEVLLDCVRMC
DEAAARPDVGADYKPKLPRSGLNPTQLTLAHAIAQVLHRKRLEWAEKENVPMGRMLSNMA
LGDIAAKLPTTQKELARMAGVRGSFVRTHGDELLALVREQLEKSRRGELAPEREAKGPRD
TNKRKREEALKTFRVEKATERKVTPSVVLTNPLMEALAAKPPQDVEALAQVPYLGEKRVR
LYGTALVDLLAQFPVLSA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccgagggcgaagagcgcgccacccgccagttggagcaggcgcgtgaaatcgcc
gtggacctggaggcggactccatgcatgccttccgcgcccggctgtgcttcctccagctc
gccaccgacgccgaagtcttcctgctggacacgctccagccgggcgtggtgccggacatg
ctcgccccgctgatggccgacccggcgcgcacgaagttcttccacgccgcccagggggat
ttgcagttcctggccgaggtgggagtccgggtccagggcctcttcgacacccaccgggcc
gccaccctgctcggctggcccaaggtgggcctggccgacctcgcccgggaacgcctgggc
gtggagctgccgaaggagcaccagcagtctgatttctccatccgccccctgcccccgggc
atgcgggagtacatcgccaatgatgtacgctacctgtgcgagctgggccgccaggtgcgc
gacgcctgccgcgaggccgacatcctggaggaggtcctcttggactgcgtgcgcatgtgt
gacgaggcggcggcccgtcccgacgtgggcgcggactacaagcccaagctgcctcgcagc
gggctgaaccccacgcagctcacgctggcccacgccattgcccaggtgctgcaccgcaag
cggctggagtgggcggagaaggagaacgtccccatggggcggatgctctccaacatggcg
ctgggggacatcgcggcgaagctgcccaccacgcagaaggagctggcgcgcatggccggc
gtgcggggctccttcgtgcgcacccacggggacgagctgctcgcgttggtccgggagcag
ttggagaagtcccgccggggcgagctggcgccggagcgcgaggccaagggcccgcgcgac
accaacaagcgcaagcgcgaggaggccctcaagacgttccgcgtggagaaggccaccgag
cgcaaggtgacgcccagcgtggtgctcaccaatccgctgatggaggcgctggccgcgaag
cctccgcaggacgtggaggcgctggcgcaggtgccctatctcggggagaagcgggtgcgc
ctgtacggcaccgcgctggtggacctgctggcgcagtttcccgtcctcagcgcctga
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