Pseudomyxococcus hansupus: A176_000964
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Entry
A176_000964 CDS
T04077
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A176_000964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mym03400
]
A176_000964
Enzymes [BR:
mym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A176_000964
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A176_000964
DNA repair and recombination proteins [BR:
mym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A176_000964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Fpg-like_C
NFACT_N
RNHCP
Zn_ribbon_6
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AKQ64052
UniProt:
A0A0H4X896
LinkDB
All DBs
Position
1116439..1117242
Genome browser
AA seq
267 aa
AA seq
DB search
MEIARRNLVRWFADRRLVRAESEDTRIFRGAERQQFDALRGRLESLVRRGKYLLFAFEGG
KGLMGHLGMTGKFVRRTEGRVEPYSRARFHLDDGHVIHFSDPRMFGRLEPAPAARLRELD
AVKILGRDPLADGLTAGQLQAAVGPSRKDLKVALMDQERISGLGNIHAAEALFRAGLHPS
RQPGSLTPDEWKRLVQAIRASIDFGLKEQEGEEPVYLEEGRSENPFLIYGRAGSPCSQCG
TRVESFTQGGRTTHFCPKCQPRGRTTK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatcgcgcggcgcaacctggtgcgctggttcgccgacaggcgcctggtgcgcgcg
gagtcggaggacacccgcatcttccggggcgccgagcgccagcagttcgacgcgctccgg
ggccggctggagtccctggtccgccggggcaagtacctgctcttcgccttcgagggcggc
aaggggctgatggggcacctggggatgacgggcaagttcgtccgccgcaccgaggggcgg
gtggagccctacagccgcgcccgtttccatctggacgatggtcacgtcatccacttttca
gatccccgcatgttcgggcgcctggagccggcgccggccgcgcgcctgcgcgagctggac
gcggtgaagattctgggccgggatccgctggcggacggcctcacggcgggacagctccag
gcggccgtaggcccctcccggaaggacctgaaggtggccctgatggaccaggagcgcatc
tccggcctgggcaacatccacgccgccgaggccctcttccgggccggacttcacccctcg
cgacagcccggctccctgacgccggacgagtggaagcggctggtgcaggccatccgcgcc
tccatcgacttcggcctcaaggagcaggaaggggaggagccggtgtacctggaggaaggg
cgctcggagaacccgttcctcatatatggacgcgcgggcagcccatgctcccagtgtggt
acccgggtcgagtccttcacccagggcggccgtaccacccacttctgtcccaagtgccag
ccacgggggcggacgacgaagtga
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