Pseudomyxococcus hansupus: A176_001906 Help Entry A176_001906       CDS       T04077                                  Name (GenBank) Protein RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism mym  Pseudomyxococcus hansupus Brite KEGG Orthology (KO) [BR:mym00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:mym03016]     A176_001906 Enzymes [BR:mym01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      A176_001906 Transfer RNA biogenesis [BR:mym03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     A176_001906  Prokaryotic type    tRNA splicing ligases     A176_001906 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  AKQ64994 UniProt:  A0A0H4WQF6 LinkDB All DBs Position 2243165..2244400 Genome browser AA seq 411 aa AA seqDB search MSRINGNHEVLSDEAGRPIKAWTVGVPFEDEAKKQLRNLRGLPFIHQWVAVMPDVHRGYG ATVGSVVPTVGAVVPAAVGVDIGCGMIAVRTTLRADQLPDSLRGVRSAIERTVPHGRSDN GGRNDVGAWRVAPARHQQAWARLVEGYDRIVAKHPRIGRGPELAHLGTLGTGNHFIELCL DESDGVWLMLHSGSRGVGNRIGSYFIELAKEDMRRWFINLPDGDLAYLAEGTEHFDDYVF AVSWAQDFAATNRDLMLHSAVEALQSSGELPPFELKDSAVNCHHNYIAREHHFGKNCFVT RKGAVRAREGDLGIIPGSMGARSYIVRGKGNADSFHSCSHGAGRVMSRAAAKRQFTVEDH AKATEGVECRKDIDVIDETPAAYKPIDAVMAAQADLVEVVHTLKQVVCVKG NT seq 1236 nt NT seq  +upstreamnt  +downstreamnt atgagccgcatcaacgggaaccatgaggtgctgtcggacgaggcgggccgccccatcaag gcgtggacggtgggggttccgttcgaggacgaggcgaagaagcagctccgcaacctgcgc ggcctccccttcatccatcagtgggtcgcggtgatgccggacgttcaccgcggttacggc gcgacggtcggaagcgtggtccccacggtgggcgcggtggtgccggcggcggtgggcgtg gacatcggatgcgggatgatcgccgtgcgcacgacgctgcgcgcggaccagttgccggac tcgctgcgtggggtgcggtcggccatcgagcggacggttcctcacggccgctcggataac ggtggccggaacgacgtgggcgcgtggcgtgtggcgccggcgcggcaccagcaggcatgg gcgcggctcgtggaggggtacgaccgcatcgtcgcgaagcacccgcgcatcggccgtggg ccggagctggcgcacctggggacgttgggaacggggaaccacttcatcgagctgtgcctg gatgagtcggatggcgtgtggctgatgttgcactccggttcgcgtggggtggggaaccgc atcgggagctacttcatcgagctggcgaaggaggacatgcgtcgctggttcatcaacctg cccgacggcgacctggcgtacctggcggaggggacggagcacttcgacgactacgtcttc gcggtgagctgggcgcaggacttcgcggccacgaaccgcgacctgatgttgcattccgcg gtggaggcgctgcagtcgagcggtgagctgccgccgttcgagttgaaggactcggcggtg aactgccaccacaactacatcgcccgtgagcaccacttcgggaagaactgcttcgtgacg cggaagggcgcggtgcgggcgcgcgagggtgacctcggcatcatccccggaagcatgggg gcgcgttcgtacatcgtccgcgggaaggggaacgcggacagcttccattcgtgcagccac ggcgcgggccgggtgatgtctcgcgcggcggcgaagcggcagttcacggtggaggaccac gcgaaggcgactgagggcgtggagtgccgcaaggacattgacgtcatcgacgagacgccg gctgcgtacaagcccatcgacgcggtgatggcggcgcaggcggacctggtggaagtggtc cacacgctgaagcaggtcgtgtgtgtgaagggatga

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