Pseudomyxococcus hansupus: A176_002093
Help
Entry
A176_002093 CDS
T04077
Name
(GenBank) internalin, putative
KO
K20276
large repetitive protein
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A176_002093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_3_2
Big_6
Big_3_3
Ig_DSCAM-DSCAML_C
DUF5703
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKQ65181
UniProt:
A0A0H4WNX4
LinkDB
All DBs
Position
2479281..2485016
Genome browser
AA seq
1911 aa
AA seq
DB search
MVLAGAVALSAIVAVAGPDTFWVGGSSDGSLTVAEEEVAQVNTYAQVTAISTDTQGRPVL
DLGTSRLGSENLSFATNKLVLVLQATSPAAGPVPGSGTGQNTIDLELSSVGRWELARVSS
YTTGTRRMVLTQPLKHAYEVLATQVILVPEYSNVTVEDDAVIEALPWNGVTGGVVALFSS
GAINLNDTGRISASAKGFRGGVFTPEPPPEDGGTPADGCDADDDGPTDYRLGSKGEGLSA
HVYDAGTTRGNANATTGGGGGACRQSGGGGGGNAGLGGMGGNARDRASGGASRDVGGLGG
ASLAYSPLTQLSLGGGGGSGQGVHATATTTPNGGAGGGIVFLRAASLNGGVVAASGGSAE
ASVVSGGGGGGGGTISLRLVGACVGTELHAEGGTGGAVQSSSSAAANAAGPGGGGGGGRI
FFQSASSSSCPVSVAAGLAGMTANGGPSSPPIPQGALPIHPVQHSPPYVGTVGFLMGGMP
NPIAVPTLSALASPIKTAYPQITGTGTPGGTVLIYRNHTASSQVQVLLARTVVGANGQFS
VTVSLPANETSTLRAAHEVQGLQGSYSGPLTLRVDTLPPDTQASTSVTFPTRATSISFTI
QGFEADGSPCNGTTTPSCSYECRLVTPSTPSPSFGACSSPRTFALSGSGTHRFEARAIDA
AQNVDASPAIIEFVVDHDAPDVAILAANPTPPAARSRFTTAEFGFATTASDVVRFECELV
RQPPFDPPTGWVTCPAHHGLTGLQNAAQYTLSVRAVDRAGNVSAAPATRSWVVDTTPPNT
EFTGSALPTVTSENISFAFQGVGGDIARLECSLDSAEFTTCTSPYRPTTRPADGPHVFQV
RAVDQAGNVDPTPAMHRWEVDTVPPPVTIVNKPSDPSNQATAGFDFDSTATDVVRFECLL
EASPEPEPPLPSWQTCAASSLFPNLTHGTRYTLSVRAVDRALNETVTPATHAWTVDLVAP
DTEFTGSPRPAVTRQNISFTFQGLGGDIARLECSLDAEAFRPCTSPYQPAVIPADGSHVF
QVRAVDHAGNVDPTPATHSWEVDTQAPPVTIVTRPADPSNQTTAGFDFNSTATDVIRFEC
LLQAVPAHVPPLPGWQTCGASSLFPNLRNATRYTLSVRAVDRAGNQSDDFATYSWSVDTM
APDTVFTGSPRPAVTRENIAFTFQGVGGDIARLECSLDAEAFTTCTSPYQPETIPADGTH
VFQVRAVDQAGNVDPTPATHSWEVDTTAPDTAISPTSPAPPRDPTNVTASPFGFTSTATD
VAYFECRLNTVAPSTPTTGNWVRCPAAHVVSGGADGTRYQLQVRAVDRVGNTDATPASHA
WLVDTTPPNTAFTAEVPNALTSLFNARFGFHAPGADDIDRFECSLDGGPFYTCASPHDLT
VGDGDHTMLVRAVDRAGNVDQTPATHFWRVLSGPVRTFITKPTETLTNNPRMEFTFSSTK
GNVEFFCRLNTEPERSCGTIDSERREVDWAIDVGEGDHTMNVQAVDLDNLDRDTVGETRY
WTVDMTPPPAPLITNPASTYINTRAPAIEGTATEGGTVTVYDVDSVPPLALGSNVISITG
LWRVDGVLLSEGSHTLGVTHRDGANNTSALEVSERRIIIVDTLPPETAVSVRPAARGRER
TVHFEFQHLNEPNFATFECSLNGADFQNCPSPHQVTVAQDGSHSMRVRAKDLAGNVDPSP
VVVEWAVDSIPPRTTIGTVPAEFSQSAASSFAFTAVDESDVVFECSLNDGGFVPCASPFV
PTGLVQGVNRLAIRATDSVGNEEVTTPAAWTVDDTPPDLPVLESPEAGSTVETPTPQFRG
VALGGAHEVFIHLDGFLLGKASVNASGEWRYTGTGNLSSGEHFVSVYAVDRALNASDPTT
PSFFKIIPSTEIDSRGGGLSCTLGGSSGGTPLTALGLVAFALLAARRGRRP
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgcgggggcggtggcgctgagcgccatcgtcgcggtcgccgggcccgataca
ttctgggtgggcgggagctcagacggctcgctgaccgttgccgaagaagaagtggcgcag
gtcaatacctacgcccaggtcaccgccatcagtacggatacgcagggccgtccggtgctc
gacctcgggacatcacggctgggcagcgagaacctgagcttcgcgaccaacaagctcgtg
ttggtgctccaggccaccagtcccgccgctggccccgtgccaggttcgggcacggggcag
aacaccatcgacctggaactcagcagcgtcggccggtgggagttggcgcgggtgtcttcg
tacacgacaggcacccggaggatggtgctgacccagccgctcaagcacgcctacgaagtg
ctcgccacgcaggtcatcctggtgcccgagtactcgaacgtcacggtcgaggacgacgcg
gtcatcgaggccttgccctggaatggcgtgacgggcggcgtggtagcgctgttctcgagc
ggggccatcaacctcaatgacacggggcgcatcagtgcctcggcgaaggggttccggggt
ggcgtcttcacgcccgagccgccccctgaggatgggggcacgcccgcggacggatgcgac
gcggatgatgacggtcccaccgattaccgcttgggctcgaagggagagggcctgtcggcg
cacgtctacgatgcgggaacgacgcgggggaatgcgaacgccaccacgggtggtggtggc
ggcgcgtgcagacagtcgggtggtggtggcggcggtaacgcggggcttggcggcatgggt
ggtaatgcgcgggatcgcgcgagcggtggcgcttcacgtgacgtcggcgggctgggcggt
gcgtcgctggcctactctccgttgacgcaactgtcgctgggcggcggcggcggtagtggc
caaggcgtgcacgccaccgcgacaacgacccccaacggcggagccggcggaggcattgtc
ttccttcgcgcggcgagcttgaacggcggcgtcgtggcggcttcgggagggagcgccgaa
gcgagtgtcgtcagcggcggcggcggtggtggtggtggcaccatctcccttcggctcgtg
ggagcctgcgtcggaacggaattgcacgcggagggtggaactggcggcgccgttcaatcg
tcgtcatcggccgcggccaatgcagcggggccgggtggcggtggcggcggtggacgcatc
ttcttccagtccgcgagcagctcgagttgcccggtgtccgtggccgcggggctcgcggga
atgacggccaacggagggccgagctcaccgccaattcctcaaggcgcgctgcccattcat
ccagttcagcattcgccgccgtacgtggggaccgtcggtttcctgatgggtgggatgcca
aatcccatcgcggtgccaacactgtcggcgctcgcatcccccatcaagacggcgtatccc
caaatcacgggaacgggcacgccgggcgggacggtgctcatctatcggaatcacacggcc
agctctcaggtccaggtgctgctcgcacggaccgtcgtgggcgcgaatggccagttctcc
gtgacggtctccctgcctgcgaatgaaacgtcgacgttgcgtgcggcacatgaagttcag
gggctgcaaggcagctacagtgggccgcttacgctgcgggtggacaccctgccaccggat
acgcaggcttccacgagcgtgacgttccccacgcgggccacgagcatcagcttcaccatt
caaggtttcgaggcggatgggtctccgtgcaatggaaccaccacgcccagttgctcgtat
gagtgcaggctggtgactccctcgacgcccagccccagctttggggcgtgttcatctcct
cgtacttttgcactcagtgggagtgggacccatcgcttcgaggcccgtgcgattgatgcc
gctcagaacgtggatgcgtcgccagccatcatcgaattcgtcgtggaccatgacgctccc
gatgtagcgattctcgctgcgaacccaaccccccccgccgcacgttcgcgattcacgacc
gctgagtttggttttgcaacgactgcttccgatgtcgtgagattcgaatgtgaactggtt
cgtcagcccccatttgacccgccgacgggatgggtcacatgtcccgcccatcatgggctg
acgggacttcagaacgctgcccaatacacgttgtcggtgcgggccgtggaccgggctggg
aatgtgtccgcagcgcccgcgacgcgttcgtgggtggtggacacgacgcccccaaacaca
gagttcacggggagcgcgctgcccacggtgacgtccgagaacatctcgttcgcgttccag
ggcgtgggcggtgacatcgcgcgactcgagtgcagcctggattcggctgagttcacgacg
tgcacgagtccttatcggccgacgacgcggccggcggatggtcctcatgtcttccaggtg
agggccgtggaccaggccgggaacgtggatccgacgcccgcgatgcatcgctgggaggtg
gacacggttcctccgccggtcaccatcgtgaacaaaccgtccgatccgagcaaccaggcg
acggcgggctttgatttcgactccacggcgacggacgtcgtgcgcttcgagtgtttgttg
gaggcgagccccgaacccgagccgcctttgccgagttggcagacgtgtgcggcctccagc
ctgtttccgaacctgacccacgggacgcggtacacgttgtcggtgcgagcggtggaccgg
gctctcaatgagacggtgacgcccgcgacgcacgcgtggacggtggatctggtggcgccc
gacacggagttcacgggtagcccgaggcccgctgtgacgcgccagaacatctcgtttacg
ttccaggggttgggcggagatatcgcgcgcctggagtgcagcctggatgccgaggcgttc
aggccgtgcacgagtccctaccagccggcagtgattcccgcagacgggtcgcacgtcttc
caggtgagggccgtggaccacgcggggaacgtggacccgacgcccgcgacccatagttgg
gaggtggacacgcaggcaccacccgtcaccatcgtgacgagacccgcggacccgagcaat
cagacgacggcgggtttcgacttcaactccacggcgacggacgtcatccgtttcgagtgc
ttgttgcaggccgtgcccgcgcacgtgccaccgctgccgggttggcagacgtgtggtgct
tccagcctgttccccaacctgagaaatgccacccggtacacgttgtcggtgcgggcggtg
gaccgggctggcaaccagtccgatgatttcgccacgtattcgtggtccgtggacacgatg
gcgccggatacggtgttcacgggaagcccgaggcccgccgtgacccgcgagaacatcgcg
ttcacgttccagggcgtgggcggggacatcgcgcggctggagtgcagcctggacgcggag
gcattcacgacgtgcacgagtccctaccagccggagacgattcccgcggacgggacgcac
gtcttccaggtgagggccgtggaccaggcaggaaacgtggatccgacccctgcgacgcat
agctgggaggtggataccaccgcgccagataccgccatcagcccgacctcacccgcgccc
ccgcgtgacccgaccaacgtgacggcgtctccatttggtttcacttcgaccgcgacggac
gtggcgtacttcgaatgccgtctgaacacggtggcgccgtcaacgcccaccacggggaac
tgggtccggtgccccgccgcgcatgtcgtttcggggggggcggatggcacccggtaccag
ctccaggtccgggcggtggaccgcgtgggaaatacagacgcaacgcccgcgagtcacgcg
tggctggtggacaccacgcctccgaatacggcgttcacggcggaggtgcctaatgcgttg
acgagcctgttcaacgctcgtttcgggttccatgcacccggcgcggacgatatcgatcgg
ttcgagtgcagccttgatggcgggccgttctacacctgcgcgtctccgcatgatctgacc
gtcggtgacggggaccacacgatgctcgttcgcgccgtggatcgcgccggcaatgtggac
caaacgcccgccacgcatttctggcgggtgctgtccggccccgtgaggaccttcatcacc
aagccgacggagaccctcaccaacaacccccggatggagttcaccttctcgtcgaccaag
gggaacgtcgaattcttctgccgtctgaacacggagcccgagcgctcttgcggcaccatc
gactcggagcggcgtgaagtggactgggccatcgacgtcggcgagggcgaccacacgatg
aacgtccaggccgtggacctcgacaatctcgatcgggacacggtgggtgagacccgatac
tggacggtggacatgacgccgcctccggcgccgctcatcaccaatccagcttccacctac
atcaacacgcgggcacccgccatcgagggaaccgccaccgagggtgggactgtcaccgtg
tacgacgtggactccgtgccgccgttggcgcttgggtcgaatgtgatctcaatcacgggc
ttgtggcgggtggacggggtgctgctctcggagggctcgcacacgctgggggtcacgcat
cgggacggagccaacaacacgtccgcactggaagtgtctgagcgtcgcatcatcatcgtg
gacacgctgccgccggagaccgccgtctccgttcggcctgcagcgcgcgggcgtgagcgg
accgtccacttcgagttccagcacctgaacgagcccaacttcgcgacgttcgagtgcagc
ctcaacggcgcggacttccagaactgtccatcaccccatcaggtcaccgtcgcccaggac
gggtcgcactcgatgcgcgtccgcgccaaggacctggcgggcaacgtggacccttcgccg
gtcgtcgtcgagtgggcggtcgattccattccgccgaggacgaccattgggacggtcccc
gccgagttctctcagtcggcggcctccagcttcgcgttcaccgcggtggatgagtcggat
gtcgttttcgagtgcagtttgaacgatggcggcttcgtgccgtgcgcctctccattcgtg
cccacgggccttgttcagggggtgaaccggctcgcgattcgcgccacggacagcgtcggg
aacgaggaagtcaccacccccgctgcatggaccgtggatgacacaccgcccgatttgcca
gtgctggagtccccggaggccgggagcacggtggagacacccacgccccagttccgcggt
gtcgccttgggcggcgcccatgaagtgttcatccatctggatggtttcttgctggggaag
gcctccgtgaatgcttcgggagagtggcgctacaccgggacagggaacctctcgagcggc
gaacacttcgtgtccgtctacgccgtggaccgggccctcaatgcgtccgacccgacgacg
ccttcgttcttcaagatcattccgtcgacggagatcgactcgcggggtggcggcttgagc
tgcacccttggaggctcaagtggcggtacgccgctcacagccctggggctcgtggcgttc
gccctgctggccgcccgccgcgggaggcggccgtag
DBGET
integrated database retrieval system