Pseudomyxococcus hansupus: A176_002206
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Entry
A176_002206 CDS
T04077
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym03410
Base excision repair
mym03430
Mismatch repair
mym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A176_002206
03430 Mismatch repair
A176_002206
03440 Homologous recombination
A176_002206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mym03400
]
A176_002206
DNA repair and recombination proteins [BR:
mym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A176_002206
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A176_002206
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A176_002206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AKQ65294
UniProt:
A0A0H4WR83
LinkDB
All DBs
Position
2605662..2607374
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AA seq
570 aa
AA seq
DB search
MRWLLPDVVEQEVASLSGELSLHPLAARVLLHRGYRTPESASAFLSDRLADLPDPFRMKG
MPAAVDRLVRAIRSREKVTLYGDYDVDGVCSTSLLFLFLKELGVPPATYIPHRLDEGYGL
NVGAVERIAAEGTRVLVTLDCGITSVAEITRAKELGLDVLVVDHHTVPPTLPPAVAVLNP
HQPGCEYPTKALCAAGVAFNFCMGLRKRLRDEGFFATRKEPNLRTMMDLVALATVADVVP
LTGANRILVSHGLQELSAGRRPGVRALKEVAGMDPDASVTAGQVGFRLGPRINAAGRLHD
ASLGLQLLCSESPETARSLAGVLDRANAERQSIESSILTQALEQAESLKDSRGLVLYDEG
WHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSIEAFHLHDALSGCAELLTRFGGH
KHAAGLTIDADRLPAFREAFEKIAAQRLAPEDLIPRCRVDAVVNPSELDADAVESLQRLG
PFGQGNPEPVLVLRRQVARPRVLQPKSGNGHGHLKLALADAPELDAIGFNMADRAPLVEG
PVDLAFQAGFDTFRGQRKLSLRLKDLRVAA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtggttgcttccagatgtggtcgagcaggaagtggcgtccctttccggggagctg
tcgcttcatccgctcgcggcgcgggtgctcctgcaccgcggctaccgcacgcccgagtcc
gcgtcggcgttcctgtccgatcgcctggcggacctgccggacccgttccggatgaagggc
atgcccgcggcggtggaccgtctcgtccgggcgattcgctcgcgggagaaggtgacgctc
tacggcgactacgacgtggatggcgtctgctccacgtcgttgctgttcctcttcctcaag
gagttgggcgtcccgcccgccacgtacatcccccaccggttggatgagggctacggcctc
aacgtcggcgcggtggagcgcatcgccgcggagggcacgcgggtgctggtgacgctcgat
tgcggcatcacctcggtggcggagatcacccgcgcgaaggagctgggcctggacgtgctg
gtggtggaccaccacaccgtgccgcccacgctgccccccgcggttgcggtgctgaacccg
caccagcccggctgcgagtacccgacgaaggcgctgtgcgccgcgggcgtggccttcaac
ttctgcatgggcctgcgcaagcggctgcgggacgagggcttcttcgccacccgcaaggag
cccaacctccggacgatgatggacctggtggcgctggccaccgtggcggacgtggtgccc
ctcacgggcgccaaccgcatcctcgtgtcgcacggcctccaggagctgagcgcgggccgc
cgtcctggcgtgcgcgccctgaaggaagtggcgggcatggacccggacgcgtccgtcacc
gccggccaggtgggcttccgtctggggccccgcatcaacgccgcgggccggctgcatgac
gcgtcgctggggctccagctcctgtgctcggagtcgccggagacggcgcgctcgctggcg
ggcgtgttggaccgggcgaacgcggagcgccagagcatcgagagcagcatcctcacgcag
gcgctggagcaggccgagtcgctcaaggactcgcgcggcctcgtgctctacgacgagggc
tggcacccgggcgtcatcggcatcgtggcctcgcgcgtggtggagcgcttctaccggccc
accgtcatggtgggggtgaaggacggggtggggaagggctcggcgcgcagcatcgaggcc
ttccacctccatgacgcgctcagcggctgcgcggagctgctgacgcgcttcggtgggcac
aaacacgccgcgggcctcaccatcgacgcggaccgcctgccggccttccgggaggccttc
gagaagattgccgcccagcgcctggccccggaggacctcatcccccggtgccgtgtggac
gcggtggtgaatcccagcgagctggacgcggacgccgtggagtcactccaacggctgggg
cccttcggccagggcaacccggagccggtgttggtgctgcgccggcaggtggcccgcccg
cgcgtgcttcagcccaagtcgggcaacgggcatggccacctgaagctggccctggcggac
gcgccggagctggacgccattggcttcaacatggcggaccgtgccccgctcgtggaaggg
ccggtggacctggccttccaggcggggttcgacaccttccggggccagcgcaagctgtcg
ctgcggctcaaggacttgcgcgtggccgcctga
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