Pseudomyxococcus hansupus: A176_002816
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Entry
A176_002816 CDS
T04077
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A176_002816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_002816
Enzymes [BR:
mym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A176_002816
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A176_002816
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AKQ65904
UniProt:
A0A0H4WSW8
LinkDB
All DBs
Position
3464550..3466061
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AA seq
503 aa
AA seq
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MTFDELQLQETLLRAVKAEGYTTPTPIQQKAIPHALAGKDVLGVAQTGTGKTAAFALPIL
QRLSAKAPPGGARPVRCLVLTPTRELAGQVGESFATYGKNLPLRHTVIFGGVGQNPQVQA
LQRGVDVLVATPGRLLDLMEQGCVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPSKR
QTLFFSATLPPDIVDLARSILTDPVRVEVTPASSTAETVSQQVYFVEREQKRGLLTHLLK
EGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVA
TDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIE
RTIRRNVPVVEDHPYRSGQAAPRPVSHASGAAPEARSSGNGGRSQGAPRPAGNGGGGGHS
AGASRRRRGGRGAGSGGGGGRGQGRPEGGRSAQGSGGSGGNASRGGQGGSRGSGGGRPAV
AQAPAKAPEASPLPPRRPSPKWF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgacgaacttcagctccaagaaaccctcctgcgcgccgtcaaggcggagggc
tacaccacccccacgcccatccagcagaaggccatcccccacgccctggctgggaaggac
gtgctgggcgttgcccagacgggcacgggcaagacggcggcgttcgcgctgcccatcctt
cagcggctgtccgccaaggcgcccccgggcggcgcccggcccgtgcgctgcctcgtcctg
acgcccacgcgcgaactggcggggcaggtgggcgagagcttcgcgacctacggcaagaat
ctgccgctgcggcacacggtcatcttcggtggcgtgggccagaatccgcaggtccaggcg
ctgcagcggggcgtggacgttctcgtggccacgcctggccgcctgctggacctgatggag
cagggctgcgtgtcgctgcgctcgctcgaggtcttcgtcctcgacgaggcggaccgcatg
ctggacatgggcttcatccacgacgtgcggcgcgtcatcaaggcgctgccgtccaagcgg
cagacgctgttcttcagcgcgaccctgccgccggacatcgtggacctggcgcgcagcatc
ctcacggaccccgtccgcgtggaagtgacgccggcttccagcaccgcggagacggtgagc
cagcaagtgtacttcgtggagcgcgagcagaagcgcggcctcctcacgcacctcctgaag
gaaggcaacatcagccgcgcgctcgtcttcacccgcaccaagcacggcgcgaaccgggtg
gcgaagcagttggagggcgcgggcgtgagctcggcggccatccacggcaacaagagccag
aacgcccgtgagcgcgcgctggacgagttccgctccgggacgctccgcgtgctggtggcc
acggacatcgccgcgcgtggcatcgacatcgacgggctgagctacgtcgtcaactacgac
ctgcccaacgtgcccgagcagtacgtccaccgcattggccgcaccggccgcgcgggcgcc
agtggcacggccgtgtccttctgcgacgccgaggagcgcgcgtacctgcgtgacatcgag
cgcaccatccgccgcaacgtgccggtggtggaggaccacccgtaccgttcgggccaggcc
gcgccgcgtcccgtgagccacgcctcgggcgccgcgccggaggcccggtcttcgggcaac
ggtgggcgttcccagggcgcgccgcgtcccgcggggaacggtggtggcggcgggcactcc
gcgggcgcttcccggcgccgccggggtggccgtggggcgggcagtggcggtggcggtggc
cgcgggcagggacgtcccgagggtggtcgctcggcgcagggttcgggcggctcgggtggc
aacgccagccggggtggccagggtggctcccgcggttcgggcggcggccgtcccgcggtg
gcgcaggctccggcgaaggcccccgaggcctcgccgcttcctccgcgtcgcccgtcgccc
aagtggttctga
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