Myxococcus hansupus: A176_003933
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Entry
A176_003933 CDS
T04077
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mym
Myxococcus hansupus
Pathway
mym03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A176_003933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mym03021
]
A176_003933
03400 DNA repair and recombination proteins [BR:
mym03400
]
A176_003933
Enzymes [BR:
mym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A176_003933
Transcription machinery [BR:
mym03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A176_003933
DNA repair and recombination proteins [BR:
mym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A176_003933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AKQ67021
UniProt:
A0A0H4WUA5
LinkDB
All DBs
Position
complement(4927630..4931835)
Genome browser
AA seq
1401 aa
AA seq
DB search
MKDIFNFFEKPKDPLSFNAIRIALASPDKIRQWSHGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHITLATPVAHIWFLKSL
PSRIGNLLDITLKELEKVLYCESYIVLDPKATPLQKGELISEDKMHRLYQEHGEDSFTTG
MGGEAVREMLKALDVEKLSEELRKDMRETTSEAKRKKYAKRLKVAEAFRVSGNKPEWMML
DVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDIIIRNEKRML
QEAVDALFDNGRRGKTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELRLHQCGLPKIMALELFKPFIYNKLEEKGYVTTIKSAKKMVEKERPEVWDILEDVIREH
PVLLNRAPTLHRLGMQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQME
ARVLMMSTNNILSPANGKPIIVPTQDMVLGIYYMTRAREFANGEGRVFASPDEVRAAYDH
GEVHLQAKVVCRIDGNRKETTVGRVLLWEVVPRAVGFDAINKVLDKKSLGGLIDLCYRLT
GEKETVLLADRVRSLGYYNATRAGISIALKDMIIPAKKQVFLDEAREVVSEIENQYLEGL
ITDGERYNKVIDIWAEITEKVAQEMMQQISQEETSGDRDGKRETRKQPSFNPIYIMADSG
ARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLSVLQYFISTHGARKGLADTALK
TANSGYLTRRLVDVAQDAIINEYDCGTMDGLFIGALVEGGEIIEPLGERILGRVALDDIL
DPVTGEVLVRANEEIDEERVRRIENSGMDKVKIRSVLTCQAKRGICVECYGRDLARGRKV
SVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAATRRAEQSSLENRYAGSVKFAGLTTVQKM
DGTLVAMNRNGEIVVVDDSGRERERYQVIYGARILVKEGQRIEPGVLMAEWDPFAIPLLT
EVGGVVRYEDIIEGVTMSETLDEVTGLSRKTIIESKDPEARPRVTIRDANGNVKDLPSSR
NPASYFLPQGSIITVNDGDEIHPGEVIAKVPRETTKTKDITGGLPRVAELFEARKPKDAA
AIAEIDGVVSFGKDTKGKRKLIITPEVNGEQRTDLAKEYLISKGKNISVHSGDRVKAGEA
MMDGSANPHDILKVLGEKELARYLVDEVQEVYRLQGVKINDKHIETIVRQMLRRVRVTDV
GDTNFLVDEQVEKWVFEEENEKVMSEGKRPAVGEPLLLGITKASLSTESFISASSFQETT
KVLTEAAINGKVDYLRGLKENVIMGRLIPAGTGLPNYKHLDIAVESPTDEVNEMEAALAA
THGDTGPLGERPVGNQTTGAA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacattttcaacttcttcgagaagccgaaggacccgctgtcgttcaacgccatc
cgcattgccctggcgtcgcccgacaagatccgccagtggtcccatggcgaggtgaagaag
ccggagacgatcaactaccgcacgttcaagccggagcgggacgggctcttctgcgcccgc
atcttcggaccggtgaaggactacgagtgcaactgcggcaagtacaagcgcatgaagcac
cgcggcgtggtgtgcgagaagtgcggcgtcgaggtcatccagtcgaaggttcgccgtgag
cgcctgggccacatcaccctggccacgcccgtggcgcacatctggttcctcaagtcgctg
ccgagccgcatcggcaacctgctcgacatcacgctgaaggagctggagaaggtcctctac
tgcgagagctacatcgtcctcgatccgaaggcgacgccgctgcagaagggcgagctcatc
agcgaggacaagatgcaccggctctaccaggagcacggtgaggactccttcaccacgggc
atgggcggcgaggccgtccgcgagatgctcaaggcgctggacgtcgagaagctgtccgaa
gagctgcgcaaggacatgcgcgagaccactagcgaggcgaagcggaagaagtacgccaag
cgcctgaaggtggccgaggcgttccgcgtctccggcaacaagccggagtggatgatgctg
gacgtgattccggtgattccgccggacctgcgcccgctcgttcccctggacggtggccgc
ttcgcgacctccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacaaccgtctg
aagcgcctccaggagctcaacgctccggacatcatcatccgcaacgagaagcggatgctg
caggaggccgtggacgcgctgttcgacaacggccgccgcgggaagaccatcacgggcccc
aacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccggttccgc
cagaacctgctcggcaagcgcgtggactactcgggccgctccgtcatcgtcgtgggtccc
gagctgcgcctgcaccagtgcggcctgcccaagatcatggcgctcgagctgttcaagccg
ttcatctacaacaagctcgaagagaagggttacgtcaccaccatcaagtcggcgaagaag
atggtggagaaggagcgtcccgaggtctgggacatcctcgaggacgtcatccgcgagcac
ccggtgctcctcaaccgcgcgcccacgctgcaccgtctgggcatgcaggccttcgagccc
gtgctgattgaaggcaaggccatccagctccacccgctggtgtgcgccgccttcaacgcc
gacttcgacggcgaccagatggccgtccacgtgccgctctccatcgaggctcagatggag
gcccgcgtgctgatgatgtcgacgaacaacatcctcagccccgcgaacggcaagcccatc
atcgtcccgacgcaggacatggtgctcggcatctactacatgacccgcgcccgcgagttc
gccaacggcgagggccgcgtgttcgcctcgcccgacgaggtgcgcgccgcgtacgaccac
ggtgaagtgcacctccaggcgaaggtcgtctgccgcatcgacggcaatcgcaaggagacc
accgtcggccgcgtgctgctgtgggaggtcgtcccgcgcgcggtgggcttcgacgccatc
aacaaggtgctcgacaagaagtcgctcggcggcctcatcgacctctgctaccgcctcacg
ggtgagaaggagacggtgctgctcgcggaccgcgtgcgcagcctcggctactacaacgcg
acccgcgccggtatctccatcgcgctcaaggacatgatcatccctgcgaagaagcaggtg
ttcctggacgaggcgcgcgaggtggtgtcggagatcgagaaccagtacctcgagggtctc
atcaccgacggcgagcgctacaacaaggtcatcgatatctgggcggagatcaccgagaag
gtcgcccaggagatgatgcagcagatctcccaggaggagacgtccggggaccgcgacggc
aagcgcgagacgcgcaagcagccgtccttcaaccccatctacatcatggccgactcgggc
gcgcgtggtagcgcccagcagatccgtcagctcgcgggtatgcgtggtctgatggcgaag
ccctccggcgaaatcatcgagacgcccatcacggccaacttccgtgaaggcctctccgtg
ctgcagtacttcatctccacgcacggcgctcgtaagggtctggcggacacggcgctcaag
acggccaactccggttacctcacccgccgtctcgtggacgtggcgcaggacgccatcatc
aacgagtacgactgcggcaccatggacggcctgttcatcggcgccctggtggagggcggc
gagatcatcgagccgctcggcgagcgcatcctgggccgcgtggccctggacgacatcctc
gaccccgtcacgggcgaggtgctggtgcgcgccaacgaggagatcgacgaggagcgcgtc
cgccgcatcgagaacagcggcatggacaaggtgaagatccgctcggtgctcacctgccag
gccaagcgcggcatctgcgtggagtgctacggccgtgacctggcccgcggccgcaaggtg
tccgtgggtgaggcggtcggcgtcatcgcggcgcagtccatcggtgagccgggtacgcag
ctcacgatgcgcaccttccacatcggtggtgcggcgacgcggcgcgcggagcagtccagc
ctggagaaccgctacgcgggtagcgtgaagttcgcgggcctcaccacggtgcagaagatg
gacggcaccctggtggccatgaaccgcaacggcgaaatcgtcgtcgtggacgactcgggc
cgcgagcgcgagcgctaccaggtcatctacggcgcccgcatcctcgtgaaggagggccag
cgcatcgagccgggcgtcctcatggcggagtgggacccgttcgccatcccgctgctgacc
gaggtcggcggtgtcgtgcgctacgaggacatcatcgaaggcgtgacgatgtccgagacg
ctggacgaggtgaccggtctgtcgcgcaagaccatcatcgagtccaaggacccggaggcg
cgtccgcgcgtcaccatccgcgatgccaatggcaacgtgaaggacctgccgagctcccgc
aacccggcgagctacttcctgccccagggctccatcatcaccgtcaacgacggcgatgag
atccacccgggcgaagtcatcgccaaggtgccgcgcgagacgacgaagaccaaggacatc
acgggcggtctgccccgcgtggccgagctcttcgaggcgcgcaagccgaaggacgcggcg
gccatcgcggagatcgacggcgtggtgtcgttcggcaaggacaccaagggcaagcgcaag
ctcatcatcacccccgaggtgaatggcgagcagcgcacggacctggccaaggagtatctg
atctccaagggcaagaacatcagcgtccactccggcgaccgcgtgaaggccggcgaggcg
atgatggacggctcggccaacccgcacgacatcctcaaggtgctgggcgagaaggaactc
gcgcgctacctggtggacgaagtgcaggaggtctaccggctccagggcgtgaagattaac
gacaagcacatcgagaccatcgtgcggcagatgctccgccgcgtgcgcgtcaccgatgtg
ggcgacaccaacttcctggtcgacgagcaggtcgagaagtgggtgttcgaggaggagaac
gagaaggtcatgtcggaaggcaagcgtcccgccgtgggcgagccgctgctgctcggcatc
accaaggcctcgctctccaccgagtccttcatctccgcgtcgtccttccaggagaccacc
aaggtgctcaccgaggccgccatcaacggcaaggtggactacctgcgcggcctcaaggag
aacgtcatcatgggccggctcatccccgccggtacgggtctgccgaactacaagcacctg
gacatcgcggtggagagccccaccgacgaggtcaatgagatggaggccgccctggccgcc
actcacggcgacaccggcccgctgggcgagcgcccggtcggcaaccagacgaccggcgcg
gcctag
DBGET
integrated database retrieval system
