Pseudomyxococcus hansupus: A176_004056
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Entry
A176_004056 CDS
T04077
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03086
RNA polymerase primary sigma factor
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A176_004056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mym03021
]
A176_004056
Transcription machinery [BR:
mym03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A176_004056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
GntR
HTH_11
HTH_59
DUF3782
Motif
Other DBs
NCBI-ProteinID:
AKQ67144
UniProt:
A0A0H4WWG1
LinkDB
All DBs
Position
complement(5080850..5081602)
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AA seq
250 aa
AA seq
DB search
MANSTRYAAEGLSHYLRNLGGHQQLTREQEYELARRARKGDESARQTLASSNLAFVVAVA
KKFANRGSRLDDLIQEGNVGLMKAIEHFDPKKNVRFATYAVWWIRAYITRYLKDNRSQVR
GGEAERGSMVDFSLDASIDEDGETTFLDRLEDNGPSPQQVFLSHEQDTEIQEALAKVRKR
IGDLGWDILTERLTQDKPLTLEELGQRWGVSRERVRQVELKTKNFLERYLSAFNENEEFV
DLGEHAADAA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcgacgaggtacgcagcggaaggcctgtcgcactaccttcggaacctgggc
gggcaccagcagttgacgcgtgagcaggagtacgagctcgcacgccgcgcccgcaagggt
gacgagtccgcgcggcagacgcttgccagctccaatctggccttcgttgtcgccgtggcg
aagaagttcgccaatcgcggttcgcgtctggatgacctcatccaggaaggcaacgtcggt
ctcatgaaggcgatcgagcacttcgaccccaagaagaacgtgcgcttcgccacctacgcg
gtgtggtggattcgcgcctacatcacccggtatctgaaggacaaccgcagccaggtgcgc
ggcggcgaggcggagcgcggcagcatggtggacttctcgttggacgccagcatcgacgag
gacggcgagacgaccttcctcgacaggctggaggacaacggcccttcgcctcagcaggtg
ttcctgtcgcacgaacaggacaccgagattcaggaggcgctcgccaaggtgcgcaagcgc
attggtgacctgggctgggacatcctcacggagcggttgacccaggacaagccgctaacg
ctggaagagctgggccagcgctggggcgtgtcgcgcgagcgcgtgcgtcaggtggagctg
aagacgaagaacttcctggagcgctacctctccgcgttcaacgagaacgaggagttcgtg
gacctgggcgagcacgcggccgacgccgcgtga
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integrated database retrieval system
