Pseudomyxococcus hansupus: A176_004925
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Entry
A176_004925 CDS
T04077
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A176_004925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_004925
03016 Transfer RNA biogenesis [BR:
mym03016
]
A176_004925
Enzymes [BR:
mym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A176_004925
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A176_004925
Transfer RNA biogenesis [BR:
mym03016
]
Prokaryotic type
tRNA degradation factors
A176_004925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AKQ68013
UniProt:
A0A0H4X2F2
LinkDB
All DBs
Position
complement(6146168..6148339)
Genome browser
AA seq
723 aa
AA seq
DB search
MLKKSVKIGESELSIEVGRLAKQADGSVVVRYGDTMLLVTAVSAREKKDIDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSCRPLFPEGYAYETQVIASVISSDPEN
EGDIHGITGASAALWVSDIPFDGPIAGIRVGRVGGELVANPTAKQREQSDLDLVMAVSRK
AIVMVEGGAEEVSEADMVAALDFGFKTAQPALDLQDELRRELNKQVRAFDKPAAVDEGLR
AKVRELAMDGIKAGYGIKEKGPRYESLGKTKKETLAKLKEQLGDGYTPLVEKHAKSVVED
LKYEHMREMTVNGGRIGDRGHDVVRQITCEVGVLPRTHGSAVFTRGETQALVVTTLGTSD
DEQRLEMLGGMAFKRFMLHYNFPPFSVNETKPLRGPGRREVGHGALAERALRNMVPKSES
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPLKAPVAGIAMGLVKEGDKIAILSD
ILGDEDHLGDMDFKVCGTSKGITSIQMDIKITGLTTEIMSRALEQARQGRLHILGEMLKT
LAESRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLNEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAQQGAAAGEAAAQPAAPAPTQPD
AKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaagagcgtcaagattggcgagagcgagctgagcatcgaagtgggccgtctg
gcgaagcaggccgacggttccgtggtggttcgctacggcgacaccatgctgctggtgacg
gccgtgagcgcccgggagaagaaggacatcgacttcctccccctgacggtggagtaccag
gagaagctgtattcggccggccgcatccccggcagctacttcaagcgcgagggccgcctc
acggagaaggagacgctggccagccgcctggtggaccgctcctgccgcccgctgttcccg
gaaggctacgcgtacgagacgcaggtcatcgccagcgtcatctcctcggacccggagaac
gagggtgacatccacggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcgacggccccatcgccggcatccgcgtgggccgcgtcggcggcgagctggtggccaac
cctaccgcgaagcagcgtgagcagagcgacctggacctggtcatggccgtgagccgcaag
gccatcgtcatggtggaaggtggcgcggaggaggtctccgaggccgacatggtcgcggcg
ctcgacttcggcttcaagacggcgcagcccgcgctggacctccaggacgagctgcggcgc
gagctgaacaagcaggtccgcgccttcgacaagccggccgccgtggacgagggcctgcgc
gccaaggtgcgcgagctggccatggacggcatcaaggcgggctacggcatcaaggagaag
ggcccccgctacgagtcgctcggcaagacgaagaaggagacgctcgccaagctcaaggag
cagctcggcgacggctacaccccactggtggagaagcacgccaagtcggtggtcgaggac
ctgaagtacgagcacatgcgcgagatgacggtcaacggcggccgcatcggtgaccgtggc
cacgacgtggtccgtcaaatcacgtgcgaagtgggcgtgctcccgcgcacccacggcagc
gccgtcttcacgcgcggcgagacgcaggcgctcgtcgtcaccacgctgggcaccagcgac
gacgagcagcgcctggagatgctgggcggcatggcgttcaagcgcttcatgctgcactac
aacttcccgccgttcagcgtgaacgagaccaagccgctgcgtggcccgggccgccgtgaa
gtcggtcacggtgcgctggcggagcgcgcgctgcgcaacatggtgcccaagagcgagtcc
ttcccgtacacggtgcgcctggtgtcggacatcctggagtccaacggctcctcctccatg
gcctccgtctgcggcggcacgctggcgctgatggacgcgggtgttccgctcaaggctccg
gtggcgggtatcgccatgggtctggtgaaggaaggcgacaagatcgccatcctctccgac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcacctcgaag
ggcatcacgtccatccagatggacatcaagatcaccggcctcaccacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgtctgcacatcctgggcgagatgctcaagacg
ctggccgagtcccgcaaggaaatcagccagtacgcgccgcgcatcaccaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gctcgcacgggtgccgcgattaacatcgaggactcgggccgcgtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgattcaggcgctgacccgcgaggccgaa
atcgggaagatctacacgggcacggtgcggaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctcggagctgtccgacaagcgcgtcaag
agcgtctccgacgtgctgaacgagggcgacgaggtgctggtgaaggtcgtcagcatcgac
aagacgggcaagattcgtctgtcgcgcaaggaggccatggccgagcgcgccgcgcagcag
ggtgccgccgccggtgaggccgccgcgcagcccgcggccccggcccccacgcagcccgac
gcgaaggcctag
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