Pseudomyxococcus hansupus: A176_006341
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Entry
A176_006341 CDS
T04077
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mym
Pseudomyxococcus hansupus
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mym03016
]
A176_006341
Enzymes [BR:
mym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
A176_006341
Transfer RNA biogenesis [BR:
mym03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
A176_006341
Prokaryotic type
A176_006341
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AKQ69429
UniProt:
A0A0H4X2P3
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All DBs
Position
7836842..7837765
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AA seq
307 aa
AA seq
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MSLLKLTFLGTSAAQPTLHRNLSGLAVKAHADLLLFDCGEGSQRQMVRYGTGFTVDAVFF
THFHADHYLGIIGFLRTLGMTGRSEPMRLYGPPSAKRVLQQAVYLGVESMSFPVEIHELK
DGDVVRRNGYTIHAIAADHRINALAYALVEDERPGRFNLEVARSLGVPEGPSFGKLQRGE
AVTLEDGRTVKPEDVLGAARPGRRLVISGDTRPCPAVVKASRDADLLVHESTFSDDEQER
AKETHHSTAREAARVAREAGARRLVLTHLSSRHDTDPSKLLAQAREEYEGPVEVAFDGLT
VELPLRD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcctcaagctcaccttcctcggtacctccgccgcgcagcccacgctgcaccgg
aacctgtccggactcgcggtgaaggcgcacgccgacttgctgctattcgactgtggcgag
ggcagccagcgacagatggtgcgctatggcaccggcttcaccgtggacgccgtgttcttc
acgcacttccacgcggaccactacctgggaatcatcggcttcctccgcacgctgggaatg
acgggccgctccgagcccatgcgcctgtacggcccgccctccgcgaagcgggtgctccag
caggccgtctacctgggcgtggagtccatgtccttccccgtggagattcacgaactgaag
gacggcgacgtggtgcggcgcaacggctacaccatccacgccatcgccgcggaccaccgc
atcaacgcgctggcctacgcgctggtggaggacgagcgccccggccgcttcaacctggag
gtggcgcgctccctgggcgtgccggagggcccgtcgttcgggaagctccagcgcggtgag
gcggtgacgctggaggacgggcgcacggtgaagcccgaggacgtgctgggcgcggcgcgg
cccggtcgccggctggtcatctccggtgacacgcgcccctgccccgcggtggtgaaggcc
tccagggacgcggacctgctggtccacgagtccaccttctccgacgacgaacaggagcgg
gccaaggagacgcaccactccacggcgagggaagcggcgcgcgtggcgagggaagcggga
gcgcggcgactggtgctcacgcacctgtccagccggcatgacaccgacccctcgaagctg
ctcgcgcaggcgcgcgaggagtacgaggggccggtggaggtggccttcgacgggctcacc
gtcgagctgcccctgcgggactga
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