Pseudomyxococcus hansupus: A176_006855
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Entry
A176_006855 CDS
T04077
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
mym
Pseudomyxococcus hansupus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
AAA_21
AAA_29
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AKQ69943
UniProt:
A0A0H4X7M6
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Position
8435196..8438429
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AA seq
1077 aa
AA seq
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MKPGLRIDALRVLGFGRFSGLTRELGPGLHLLYGPNEAGKSTLLAFLRSMLFGFEKRGQP
ERYEPAHGGAFGGELTLATSAGSLLVRRIASRRTSEGELSVRDADGQELSKESLESALAH
VSRELFFDVFAFRLDELAGFERLTEERGASEALVAASMRGARRLPEVMDQLRKSTELIYK
PNGVKSSLNVTMKALEDVQARLRLEGDRPARYFSEKARLGALVEEQRVLEADLLELVARL
ERLTRLEAALGDTGALAQARAELETLPALESFPEAGESRLEDGLHRRRNCRAEGARLALR
LATADADLERLSAPSGVRGREEALGLALAAYTERAVLLRALPSRRAALAEKQRQVELALR
ELGLPVDGPGLLALDLSASVRVALEELASRLSAAEATHREAEGTRARAVSERERLDGALR
RVDAELLALPQERTSQLRQQQAGLGRLRTVRGDLERLSEQRAELHRQFESVRTQGEPHLT
TAVLPLWWVPAVAVVAVALAVTAWLLAGNLVGALCLGVGLLLTGVLELARRRVEAARDAD
VAAQGARQRWRQQEEERLRSALMALSAREEVLHRELLSAATEAGLNLVATAADMAAREAT
LADALERAGRRELLQREQEKLHAEHTAALREEHRASEAVGEVEARRGNLEAELAEHLSAR
CFPPTLAASAALTLWRDAAALRQRLLDVGAEAAALSVDAQACAQVTARLWAEAVAAELVP
GSAKAHGLDSGAMEPIATRVASALEQERARRLELRTVEASHHELLAEKARLDGLSHDEEA
ALAALLAEGGSADEETFRRRAAQSRRYVELTGRTRELSHRIEARTGLSETSARQALIDVG
GEQGLRAELESLREKHAEAQERQKAVLTECGALRHQLEQWENDDALAQLRIVEESLRAKA
AELARQYAADRLTLALLSRARRRFEEEQQPRVVQLASEHFAALTQGRYPRVFIPTGEERE
LRVGDGQRDWSAAQLSRGTREQLYLAFRLAVVRDFGETRGALPLIVDDVLVNFDPERARG
AIHLLAKLSEHQQVIAFTCHPWLRDAFAAEGARVQTLDATPHETTPVPVSVPVLKAG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggggctgcgcatcgacgcgctgcgagtgctgggcttcggccgcttctccggc
ctcacgcgggagctgggcccgggcctccatctgctgtacggccccaacgaggcggggaag
agcaccctgctggccttcctgcgcagcatgctgttcggcttcgagaagcgcgggcagccg
gaacggtatgagccggcccacggcggcgccttcggcggcgagctgacgctggccaccagc
gcgggctcgctgctggtgcgccgcatcgcgagccggcgcacgtccgagggcgagctgtcg
gtgcgcgacgcggacgggcaggagctctccaaggagtcgctggagagcgcgctggcgcac
gtgtcgcgtgagctgttcttcgacgtgttcgccttccggttggatgagctggccggcttc
gagcggctcaccgaggagcgtggcgcctccgaggccctggtcgccgccagcatgcgcggc
gcgcggcgactcccggaggtgatggaccagctccgcaagagcaccgagctcatctacaaa
cccaacggcgtgaagtcgtccctcaacgtgacgatgaaggcgctcgaggacgtgcaggca
cggctgcggctggaaggggaccggcccgcgcgttacttctcggagaaggcgcggctgggc
gccctcgtcgaggagcagcgggtgctggaagccgacctgctggagctggtcgcccgactg
gagcggctgacgcggttggaagcggcgctgggcgacacgggagcgctggcgcaagcacgg
gccgaactggagacgctgcccgcgctggagtccttccccgaggcgggtgaatcgcggctg
gaggacgggctgcaccggcgacggaactgtcgcgccgaaggggcccggctggcgctgcgg
ttggcgacggcggacgcggacctggagcgcctgtccgcgccctccggggtgcggggacgt
gaggaggcgctcgggctggcgttggcggcctacaccgagcgcgcggtgctgctgcgcgcc
ctgccctcccgccgcgccgcgttggcggagaagcagcggcaggtggagctggcgctgcgg
gagctgggccttccggtggatgggccgggcctgctcgcgctggacttgagcgccagcgtc
cgcgtggcgctggaggagctggcgtcgcgactgtcggcggcagaggccacgcaccgcgag
gcggagggcacgcgggctcgggccgtgtcggaacgggagcggctggacggcgcgctgcga
cgggtcgacgcggagctgttggcgctgccccaggaacggacgtcgcagctccgtcagcaa
caggcgggcctgggacggctgcgcacagtgcgcggggacctggagcgcctgtcggagcag
cgcgccgagctgcaccggcaattcgaaagcgtccgcacccagggcgagccccacctcacg
acggcggtcctccctctctggtgggtgcccgccgtggcggtggtcgcggtggccctcgcg
gtgacggcgtggttgctcgcgggcaacctcgtgggcgcgctgtgcctgggcgtcgggctg
ttgctcacgggggtgttggagctggcacggcggcgcgtggaggcggcgcgcgacgcggac
gtggcggcgcagggggcgcgtcagcgttggcggcagcaggaggaggagcgcctgcgctcg
gcgctcatggcgctgtcggctcgagaggaagtcttgcaccgggagctgctgtccgccgcc
accgaagccggtctgaatctggtggcgacggccgcggacatggcggcgcgagaggccacg
ctcgcggatgcgctggagcgggcgggccggcgcgaattgctgcaacgcgagcaggagaag
ctccacgccgagcacaccgccgccctgcgcgaggagcaccgcgcgagcgaggcggtgggc
gaagtggaggcacggcgagggaacctggaggcggagctggcggaacatctgtccgcgcgg
tgcttcccgcccacgctggccgcgtccgcggcgctgacgctgtggcgagacgccgcggcg
ctgcggcagcggctgctggacgtgggcgcggaggcggcggcgctctccgtggatgcccag
gcgtgcgcgcaggtgacggcgcggttgtgggcggaggccgtggcggcggagctcgtcccg
ggctccgcgaaggcgcacgggctggactcgggggcgatggagcccatcgccacgcgggtg
gcctcggcgctggagcaggagcgcgcccgccgtctggagcttcggacggtggaggcgagc
caccacgagctgctcgcggagaaggcgcgcctggatgggctgtcccatgacgaagaggcg
gccctggcggcgctgctggccgagggcggcagcgctgacgaggagacgttccgccgccgg
gccgcgcagtcgcgccgctacgtggaactcacgggccggacgcgcgagctgtcacaccgc
atcgaggcacgcacgggcttgtcggagacgtcggcccggcaggcgctcatcgacgtgggc
ggagagcagggcctgcgcgcggagctggagtccttgcgcgagaagcacgccgaggcccag
gagcgacagaaggccgtgctcacggagtgcggcgcgctccgccaccaactggagcagtgg
gagaacgacgacgcactggcgcagcttcgcatcgtcgaggagtccctgcgggccaaggcc
gccgagctggcgcggcagtacgcggcggaccggctgacgctcgcgctgctgtcccgggcc
cgccgccgcttcgaggaggagcaacagccgcgcgtggtgcagctcgcctccgagcacttc
gccgcgctcacccagggccgctacccgcgcgtcttcatccccacgggcgaggagcgcgag
ctgcgcgtgggcgacggacagcgcgactggagcgcggcgcagctctcccgagggacacgg
gagcagctctatctggcgttccgcttggccgtggtgcgcgacttcggtgagacgcgcgga
gcgctgccgctcatcgtcgacgacgtgctggtgaacttcgacccggagcgggcacgcggc
gccatccacctgctggcgaagctctccgagcaccagcaggtcatcgccttcacctgccac
ccctggctgcgtgacgccttcgccgccgagggcgcccgggtgcagacactggacgccacg
ccccatgagacgacgcccgtccccgtctccgtgcccgtgttgaaagccgggtag
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