Pseudomyxococcus hansupus: A176_007382
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Entry
A176_007382 CDS
T04077
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mym
Pseudomyxococcus hansupus
Pathway
mym03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mym00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A176_007382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mym03019
]
A176_007382
03009 Ribosome biogenesis [BR:
mym03009
]
A176_007382
Messenger RNA biogenesis [BR:
mym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A176_007382
Ribosome biogenesis [BR:
mym03009
]
Eukaryotic type
Pre-60S particles
RNases
A176_007382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKQ70470
UniProt:
A0A0H4XA27
LinkDB
All DBs
Position
9072920..9073471
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AA seq
183 aa
AA seq
DB search
MSSREQRLVWLDLEMTGLDPETCSIIEVGVIITGPDLRPLAEFERVIWQPEESLLRMEPV
VREMHTRNGLLEKVRASTTSLRVAEREVTALVAEHCALGEGILAGNSIHTDRRFLIRYMP
LLERYLHYRMVDVTSLKVLTRAWYPNLVEPRKAPSGHTALADLRASISELQYYRDTLFRP
TPA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcgtgagcagcgcctggtctggctggacctggagatgaccgggctggacccg
gagacgtgttccatcatcgaggttggcgtcatcatcacgggcccggacctgcggcccctc
gcggagttcgagcgggtcatctggcagccggaggagtcgctgctgcgcatggagcccgtc
gtccgggagatgcacacccgcaacgggctgctggagaaggtgcgcgcctccacgacctcg
ctgcgcgtggcggagcgggaagtgacggcgctcgtcgcggaacactgcgccctgggcgag
ggcatcctcgccggcaactccatccacaccgaccggcgcttcctgattcgctacatgccc
ctgctggagcgctacctgcactaccgcatggtggatgtgacgagcctcaaggtgctgacg
cgcgcctggtacccgaacctggtggagcctcgcaaggcgcccagcgggcacacggcgctg
gcggacctgcgcgccagcatctccgagctccagtactaccgcgacacgctcttccgcccg
acgccggcctag
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