Mycolicibacterium neoaurum NRRL B-3805: MyAD_01125
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Entry
MyAD_01125 CDS
T05013
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myn03032
]
MyAD_01125
03400 DNA repair and recombination proteins [BR:
myn03400
]
MyAD_01125
Enzymes [BR:
myn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MyAD_01125
DNA replication proteins [BR:
myn03032
]
Prokaryotic type
DNA Topoisomerases
MyAD_01125
DNA repair and recombination proteins [BR:
myn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MyAD_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMO04022
LinkDB
All DBs
Position
complement(238614..239630)
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSVLDGPGITRLRKGKGFTYRGPDGDPVADADHLARIKDLVIPPAWRKVWISPYGN
GHIQAVGTDAAGRRQYLYHQAWQEERAEEKFDRVLEMSTALPAWRARIAADLTGRGLSRD
RVLALALHLLDLGYFRAGGEQYAEEHESYGLATLQCEHVTLRKGAVAFDFPAKSGVRRTW
EIDDPEVLRAVRALLRRDARTERLLVCRNDSGWVEIHASDLNTRFKELVGDEYSVKDLRT
WHGTVLAAAAFAEADPGETERGRKRAVSGVMKQVSEELGNTPAVARSSYVDPRVVAGYEQ
GATIAAAAKRAARQKDRAAAVAILEKATRSLVRKVAKG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgcggcggagcgttctcgacggaccgggtatcacccggctgcggaagggaaaa
ggcttcacctatcggggtcccgacggtgacccggtggcggacgccgaccacttggcccgc
atcaaggatctcgtcatcccgccggcctggcgcaaggtgtggatcagtccgtacggcaac
ggtcacatccaggcggtgggcaccgatgccgcgggccgcaggcagtacctctaccaccag
gcctggcaggaggagcgcgccgaggagaagttcgacagagtgctggagatgtcgactgcg
ttgcccgcgtggcgtgcgcggatcgccgcagacctcaccgggcgcgggctgtcccgtgac
cgggtgctggcgctggcattacacctgctcgatctcggctatttccgcgccggcggcgag
cagtacgccgaggaacatgagtcctacggactggcgaccctgcaatgcgagcatgtcacc
ctgcgaaaaggcgcggtggccttcgatttcccggccaagagcggcgtgcgcaggacatgg
gagatcgatgatcccgaggtgctgcgcgccgtgcgcgcgctgttgcgccgcgatgcccgt
accgagcggttgctggtgtgccgcaacgattcgggctgggtcgagatccacgcatcggac
ctgaacacgcgtttcaaggagctggtcggcgacgagtacagcgtcaaggatctgcgcacc
tggcacggtacggtgctggcggccgcggccttcgccgaggccgatccgggcgagacggaa
cgcggacgcaagcgcgcggtgtcgggggtgatgaagcaggtgtccgaggaactcggtaac
accccggcggtggcgcggagctcgtatgtcgatccgcgggtggtcgccggctacgagcag
ggcgcaaccatcgccgccgcggccaaacgcgccgcacggcagaaggaccgggcggctgcc
gtggcaatcctggagaaggcgacccgcagcctggtccgcaaggtcgccaagggctga
DBGET
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