Mycolicibacterium neoaurum NRRL B-3805: MyAD_08610
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Entry
MyAD_08610 CDS
T05013
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03420
Nucleotide excision repair
myn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MyAD_08610
03430 Mismatch repair
MyAD_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myn03400
]
MyAD_08610
Enzymes [BR:
myn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MyAD_08610
DNA repair and recombination proteins [BR:
myn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MyAD_08610
MMR (mismatch excision repair)
Other MMR factors
MyAD_08610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMO08188
LinkDB
All DBs
Position
1813903..1817157
Genome browser
AA seq
1084 aa
AA seq
DB search
MTATPTPPPTAQHSPAELAEALGLFTPTPEQTAVIAAPPGPVVVIAGAGAGKTETMAARV
VWLVANGYARPDQVLGLTFTRKAAGQLLRRVRTRLARLAGTGLGRDVRTDEPPTISTYHA
FAGNLLREHGLLLPIEPDTRLIGETELWQLAFRVVCEHPRVLDTEKTPAAITALVLRLSG
ALSEHLVDTAALRDTHIELERLIHHLPAGPNQRGGPAQWLLKLLATQTERTDLIELIDEL
HRRMRAERVMDFGAQMSAAARLAAAAPQVGAELRQRYRVVLLDEYQDTGHAQRIALSALF
GGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPHSDGTPAPTLELRTSWRNPAE
ALHLANAVSEQARRRSVSVRELLPRPDATPGEVRAALLDDVVTERDWVADQIAARYLAVE
TPPTAAVLVRRNADAAPMAEALTARGVPVEVVGLAGLLSIPEVADVVAMLRLVVDPTGGP
AAMRVLTGPRWRLGARDITALWQRATELDDPAPGEHGTAARIVAQAAPDADTACLADAIC
DPGPEERYSATGYARLVALGRELTVLRSHLGYPLPDLVAEIRRVLGVDAEARAARPVSAG
WGGTEHLDAFGDVVAEFAERSDGSPTGLLAYLDVAADVENGLAPAEVSVAADRVQILTVH
AAKGLEWEIVAVPHLSGRIFPSTAMARTWLSDAGELPPLLRGDRATLSEHGVPVLDTSDV
NDRKALSDKIAQHKDVLAVRRGDEERRLLYVALTRSEHTLLLSGHHWGPTESKPRGPSEF
LVELKAIIETSGCGVIDRWDPEPADGEPNPLRGSTVEAVWPVEGSRAHDVERGAALVEHA
AEQAQSGIDPEGWAADVDALLAERERAAAAAPVVLPGQLSVSTLVDLGKDRAAALSRLRR
RLPSRPDPHALLGTAFHEWVQRYFHAERLFDLDDLPGAVDGDAGRAHAEERAELQTAFAS
SPWAARTPLDVEVPFDMLLGSDDTGEPTVVRGRIDAVFAESDGGVIVVDWKTGDPPSTPE
AREHAAVQLAVYRLAWAGLHDCPVDAVRAAFHYVRSGVTVIPDELPDAEDLAALLADARA
QELR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacccccacaccgccaccgacggcccagcacagccccgccgaattggccgag
gcactgggactgttcaccccgaccccggagcagaccgccgtgatcgccgcaccacctggc
ccggtggtggtcatcgccggggccggtgcgggtaagaccgagacgatggccgcgcgggtg
gtctggctggtcgccaacgggtacgcacgacccgaccaggtgctcggtctcaccttcacc
cgcaaggccgccggacagctgctgcggcgggtccggacccggctggcccggttggccggc
accggactcggccgcgatgtccgcaccgacgagccgcccaccatcagcacctatcacgcc
ttcgcgggcaacctgctgcgcgagcacggactgctgctcccgatcgagccggacacccgg
ttgatcggcgagaccgagctgtggcagttggcgtttcgggtggtgtgtgagcatccccgg
gtgctcgacaccgagaagaccccggcggcgatcaccgctctggtgctgcgactgtccggc
gcgctgtccgagcacctggtcgacaccgcggcactgcgcgatacgcacatcgaactcgaa
cgactgatccaccatctgcccgccggcccgaatcagcgtggcggacccgctcaatggcta
ctgaagctgctggccacccagaccgaacgcaccgatctcatcgagctgatcgacgagttg
catcggcggatgcgcgcggagcgggtcatggacttcggcgcgcagatgtccgccgcggcc
cggttggcggccgccgccccgcaggtgggagccgaactgcggcaacgctatcgggtggtg
ctgctcgacgagtaccaggacaccggccacgcccagcgcatcgcgctgtcggcgctgttc
ggcggcggtgtggacgacggtctcgcgctcaccgcggttggcgatccgatccaatcgatc
tacggatggcgcggtgcgtcggcgacgaacctgccccggttcaccaccgacttcccgcac
tccgacggaacgccggcgccgacgctggaactgcgcaccagctggcgtaatcccgccgag
gctctgcacctggccaacgcggtgtccgagcaggcccggcgacgatcggtcagtgtgcgt
gagctgctgccccggcccgacgccactccgggggaggtacgcgccgcactgctcgatgac
gtggtgaccgagcgggactgggtcgccgatcagatcgccgcccgctatctggccgtcgag
acaccgcccacggcggcggtcctggtgcgtcgcaacgccgatgccgcgccgatggccgag
gcgctgaccgcccgcggcgtgccggtggaagtcgtcgggctcgcgggactgctgtccata
ccggaggtcgccgatgtcgtggcgatgctgcggctggtggtcgatcccaccggtggtccg
gcagccatgcgggtgctcaccggtccgcgctggcggctcggggcgcgtgacatcaccgca
ctgtggcagcgcgccaccgaactcgacgatccggcccccggcgagcacggcaccgcggcg
cggatcgtcgcgcaggccgcccccgacgccgacaccgcctgcctggccgatgccatctgc
gatcccggccccgaggaacggtattcggcgaccgggtatgcgcgcctcgtcgcgctgggg
cgtgagctgaccgttctgcgttcgcatctgggctatccgctgccggatctggtcgccgag
atccggcgtgtgctcggtgtcgacgccgaggcacgggccgcccgtccggtgtccgcgggg
tggggtggcaccgaacacctggacgcgttcggtgatgtggtggccgagttcgccgagcgc
tccgacggctcgccgacgggtctgctggcctatctggacgtggccgccgatgtcgagaac
ggcctggcgccggccgaggtgagcgtcgccgccgaccgggtccagatcctcaccgtgcac
gctgccaaggggctggagtgggagatcgtcgcggtgccgcacctgagcggacggatcttc
ccgtccaccgcgatggcacggacctggctctccgatgccggcgagttgccgccgctgctg
cgtggcgaccgggccacgctgtccgagcacggcgtaccggtgctggacaccagcgacgtg
aacgaccgtaaagcgctgtccgacaagattgctcagcacaaggatgtcctggccgtgcgg
cgcggtgacgaggagcgtcgactgctgtatgtggcgttgacccgatccgagcacacccta
ctgttgtcggggcatcactgggggcccaccgagtccaagcctcgtggcccgtcggagttc
ctggtcgagctcaaggcgatcatcgagacgtcgggctgcggtgtcatcgaccgatgggat
ccagagcccgccgacggtgagccgaacccgttgcgaggcagcacagtcgaagcggtctgg
cctgtcgaagggtcacgcgcgcatgatgtcgagcgcggcgcggcgctggtcgagcacgca
gccgaacaggcgcaatccgggatcgaccccgagggttgggcggccgatgtggacgccctg
ctcgccgaacgcgaacgggcagctgccgcggcgccggtcgtgctgcccgggcagctctcg
gtcagcaccctggtcgatctcggcaaggatcgcgccgccgcgctgagcaggctgcggcgc
aggctcccgtcccgtccggacccacatgcgttactgggtaccgcttttcacgagtgggtg
cagcgttacttccatgccgagcggttgttcgacctcgatgatctgcccggcgcggtcgac
ggcgacgcggggcgcgcgcacgccgaggagcgagccgaactgcagaccgccttcgcctcg
tcgccatgggcggcgcgcaccccactcgatgtggaggtccccttcgacatgctcctgggc
agcgacgacacgggcgagccgacggtggtgcgcggccggatcgatgccgtcttcgccgaa
tccgacggcggcgtgatcgtggtggactggaagaccggcgacccaccgtcgacgccggag
gcccgcgagcacgccgccgtgcagctcgcggtgtaccggttggcgtgggccgggctgcac
gactgcccggtcgacgcggtgcgtgcggcgttccactacgtccgcagcggggtgacggtc
attcccgacgaactacccgacgccgaggacctcgcggccctgctggccgacgccagggct
caggagttgcgatag
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