Mycolicibacterium neoaurum NRRL B-3805: MyAD_10715
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Entry
MyAD_10715 CDS
T05013
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MyAD_10715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myn03400
]
MyAD_10715
Enzymes [BR:
myn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MyAD_10715
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MyAD_10715
DNA repair and recombination proteins [BR:
myn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MyAD_10715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DUF6215
Motif
Other DBs
NCBI-ProteinID:
AMO05579
LinkDB
All DBs
Position
2292065..2292934
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVEVVRRGLDAHVLGRTIADVQVLHPRAARRHLAGSLDLTARLRGTQITGTGRRG
KYLWLTVSSGEAIVVHLGMSGQMLIGAVPNPTHLRIATTFADGSSMNFVDQRTFGGWMLA
DLVTIDGSEIPEPVAHIARDPLDPAFDRDGVVTVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRAKVNGARLSSALTRRQLAEILDAATEVMTGALGQGGTSFDSLYVNVNGESGYFD
RSLEAYGRVDEPCRRCGAPMQRDKFMNRSSFYCPKCQPRPRVRRTASAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacttcctgaggtcgaggtggtgcggcgcggacttgacgcgcacgtgctgggc
cggaccatcgccgacgttcaggtgctgcacccgcgtgccgcccgacggcatcttgccggg
tctctcgacctgaccgcgcggctgcgcggcacgcagatcaccggaaccggacgccggggc
aagtacctgtggttgacggtgagcagtggtgaggccatcgtcgtgcacctggggatgagc
gggcagatgctgatcggtgcggtgcccaaccccacccacctgcgcatcgccaccacattc
gccgatggcagctcgatgaacttcgtcgaccagcgcaccttcggtggctggatgctggcc
gacctggtgaccatcgacggtagcgagatccccgaacccgtcgcgcacatcgccagggat
ccgctggacccggccttcgaccgcgatggcgtcgtgacggtgttgcggcgcaagcattcc
gagatcaagcgccagctgctcgaccagacggtggtgtccgggatcggcaacatctacgcc
gatgaggcgctgtggcgggccaaggtcaacggcgcccggttgtcctcggcgctgacgcgc
cggcagctcgccgagatcctggatgcggccaccgaggtgatgaccggagccctcggccag
ggcggcacgtcgttcgattcgttgtatgtcaacgtcaacggtgaatccgggtacttcgac
cgatcactggaggcctacggtcgggtagacgaaccgtgccggcgctgcggtgcgccgatg
cagcgggacaagttcatgaaccgctcgtcgttctattgcccgaaatgccaaccgcggccg
cgggtccggcgtaccgctagcgctggttga
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integrated database retrieval system
