Mycolicibacterium neoaurum NRRL B-3805: MyAD_11405
Help
Entry
MyAD_11405 CDS
T05013
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MyAD_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myn03019
]
MyAD_11405
03016 Transfer RNA biogenesis [BR:
myn03016
]
MyAD_11405
Enzymes [BR:
myn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MyAD_11405
Messenger RNA biogenesis [BR:
myn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MyAD_11405
Transfer RNA biogenesis [BR:
myn03016
]
Prokaryotic type
tRNA degradation factors
MyAD_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
PKD_3
Motif
Other DBs
NCBI-ProteinID:
AMO05693
LinkDB
All DBs
Position
2441137..2443392
Genome browser
AA seq
751 aa
AA seq
DB search
MSAVETDEGVFESTAVIDNGSFGTRTIRFETGRLARQAAGSVVAYLDEETMLLSATTASK
SPKDHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVSGLR
NEIQVVVTVLSLDPKDLYDVLAINAASASTQISGLPFSGPVGGVRVALISTPENKAGQWV
AFPTVEQLEDAVFDMVVAGRKAGDDVAIMMVEAEATEKVIELIAGGAGAPTEAVVAEGLE
AAKPFISALCTAQEELHAAAGKATVEYPLFPDYQADVYEQVAAVATEALSQALTIAGKAE
RDDRTDEIKGEVLERLAGQFEGREKEIGAAYRSLTKKLVRQRILTDHFRIDGRGVTDIRA
LSAEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFS
TGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCAS
TLSLLNAGVPLKAPVAGIAMGLVSDDVDGERKFVTLTDILGAEDAFGDMDFKCAGTKDFV
TALQLDTKLDGIPSKVLAGALAQAKDARITILEVMAEAIDEPDEMSPYAPRITTIKVPVD
KIGEVIGPKGKMINSITEETGASISIEDDGTVFVGASNGEAAQAAIDKINAIANPQLPKV
GERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVAKVGDKMRVEIADID
NRGKISLVLVDEESSTSAPETEAAEPAGAEA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagttgaaaccgacgagggtgtgttcgagtccaccgccgtcatcgacaacggg
agcttcggcacccgcaccattcgcttcgagaccggccgcttggcccgccaggccgccggc
tccgtcgtcgcctacctcgatgaagagacgatgctgctgagcgccaccaccgccagcaag
tcgccgaaggatcatttcgacttcttcccgctgaccatcgacgtcgaggagcggatgtac
gccgcgggccggatccccggctcgttcttccgtcgtgagggacgtccctccaccgacgcg
atcctgacctgccgtctgatcgaccggccgctgcgcccgaccttcgtctccggtctgcgc
aacgagatccaggtcgtggtgacggtgctgagcctggatcccaaggatctgtacgacgtg
ctggcgatcaacgccgcatcggcatccacccagatctccggcctgccgttctccggcccg
gtcggcggcgtacgcgtcgccctgatctccactcctgaaaacaaggctggccagtgggtt
gcgttcccgaccgtcgagcagctcgaagacgccgtcttcgacatggtggttgccgggcgt
aaggccggtgacgacgtcgccatcatgatggtcgaggccgaggccaccgagaaggtcatc
gaactgatcgccggcggcgccggtgcccccaccgaggccgtcgtggccgagggcctggag
gccgccaagccgttcatctcggcgctgtgcaccgcgcaggaggaactgcacgccgccgcg
ggtaaggcgaccgtggagtacccgctgttcccggattaccaggcagatgtgtacgagcag
gtcgccgcggtggccaccgaggcgctctcgcaggcgctcaccatcgcgggcaaggccgag
cgcgatgaccgcaccgacgagatcaagggcgaggtgctcgagcgcctggccggtcagttc
gagggccgcgagaaggagatcggcgccgcctaccggtcgctgaccaagaagcttgtgcgg
caacgcatcctgaccgaccacttccgcatcgacggtcgtggcgtcaccgatatccgggca
ctgtcggccgaggtcgcggtcatcccgcgggcgcacggcagcgcgttgttcgagcgtggc
gagacccagatcatgggtgtcaccacactcgacatggtcaagatggcccagcagatcgac
tcgctcgggcccgagacctccaagcgttatatgcatcactacaacttcccgccgttctcg
accggcgagaccggccgtgtgggctcgcccaagcgccgtgagatcggccacggtgcgctc
gccgagcgtgctctgatgccggtgctgccgagcgtcgaggagttcccgtacgccatccgc
caggtgtcggaggcgttgggctccaacggttccacctcgatgggctcggtgtgtgcctcg
accctgtcgctgctgaacgccggtgtgccgctcaaggcgccggtcgccggtatcgccatg
ggtctggtctccgacgatgtcgatggtgagcgcaagttcgtcaccctgaccgatatcctc
ggcgccgaggatgcgttcggcgacatggacttcaagtgcgcgggtaccaaggacttcgtc
acggccctgcagttggacaccaagctcgacggcatcccgtccaaggtgttggccggtgcg
ctggcccaggccaaggacgcccggatcaccatcctggaggtcatggccgaggccatcgac
gagcccgacgagatgagcccgtacgcgccgcgcatcaccaccatcaaggtcccggtggac
aagatcggtgaggtcatcgggcccaagggcaagatgatcaactcgatcaccgaggagacc
ggcgcgtcgatctccatcgaggacgacggcaccgtgttcgtcggtgccagcaatggcgag
gccgcgcaggccgcgatcgacaagatcaatgccatcgccaatccgcagctgcccaaggtg
ggtgagcggttcctgggaacggtggtcaagaccaccgacttcggagcgttcgtctcgctg
ttgccgggtcgtgacggtctggtgcacatcagcaagctgggccgcggcaagcgcatcgcc
aaggttgaggatgtcgccaaggtcggtgacaagatgcgtgtcgagatcgccgatatcgac
aaccgcgggaagatctcgctggtgctggtcgacgaggagagctcgacgagcgccccggag
accgaggcggccgagcccgccggcgcggaagcgtag
DBGET
integrated database retrieval system
