Mycolicibacterium neoaurum NRRL B-3805: MyAD_11525
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Entry
MyAD_11525 CDS
T05013
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MyAD_11525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myn03019
]
MyAD_11525
Messenger RNA biogenesis [BR:
myn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MyAD_11525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AMO05713
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All DBs
Position
2462473..2464182
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AA seq
569 aa
AA seq
DB search
MNTVAGEPAPTTQPTLNAPGPLAPGGLRITALGGIGEIGRNMTVFEHLGRLLIIDCGVLF
PNHDEPGVDLILPDLRHVENRLDDVEALVLTHAHEDHIGAIPHLLKLRGDIPVVGSKFTL
ALVVEKCREHRIKPKIIEVAEGQRSTHGVFECQYFAVNHSIPDALAIAVHTGAGTILHTG
DIKLDQLPPDGRPTDLPGMSRLGDAGVDLFLCDSTNAEHPGVSPSESEVGPTLHRLIRGA
DGRVIVACFASNVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVADEDILDI
AAAEMMPPERVVLITTGTQGEPMAALSRMSRGEHRSITLTAGDLVILSSSLIPGNEEAVF
GVIDALAKVGTRVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRHLRANASL
AVSTGVPPENVMLAENGVSVDLVNGVASIAGAVPVGKRFVDGLVTGDVGESTLGERLTLS
AGFVAVTVVVHRGTGRAAGPAHLHSRGFSEDPKALDPVAEKVAQELERLAGDQVTDPVRI
AQAVRRTVGKWVGETYRRQPMIVPTVIEI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtcgccggcgaaccggctcccacgactcagcccacgctgaacgcgccgggg
ccgttggcgccgggtgggctgcgcatcacggcgctgggcggcatcggcgaaatcggccgc
aacatgaccgttttcgagcatctcggtcgattgctcatcatcgactgcggtgtgctgttc
cccaaccacgacgagcccggcgtcgacctgatcctgccggatcttcgccacgtcgagaat
cgcctcgacgatgtcgaggcgctggtgctcacacacgcccatgaggatcacatcggcgcg
atcccgcacctgctgaagttgcgcggagatatcccggtcgtcggctcgaagttcacgctg
gcattggtggtcgagaagtgccgcgagcatcgcatcaagcccaagatcatcgaagtcgcc
gaggggcagcgcagcacccacggggtgttcgaatgtcagtacttcgcggtcaaccactcg
atccctgatgcgcttgccatcgccgtgcacaccggcgcgggcaccatcctgcacaccggc
gatatcaaactcgaccagctcccgccggacgggcggcccaccgatctgcccggcatgtcg
cggctcggggatgccggtgtggatctgttcttgtgtgactcgaccaatgccgagcatccc
ggagtgagcccgtccgagagtgaggtcggccccaccctgcaccggctgatccgcggcgcc
gatggccgcgtgatcgtggcctgcttcgcctccaacgtcgatcgtgtccagcagatcatc
gacgccgcagtcgcgttgggccggcgggtgtccttcgtggggcgctccatggtgcgcaac
atgggcatcgcccgcgagctcggcttcctgcgggtggccgatgaggacatcctcgatatc
gcggccgccgagatgatgccgcccgaacgggtcgtgctcatcaccaccggcacccagggt
gagccgatggccgcgctgtcgcggatgtcgcgcggcgagcaccgcagtatcaccctgacc
gccggtgacctggtcatcctgtcctcgtcgctgatccccggcaacgaggaggcggtgttc
ggtgtcatcgatgcgctggccaaggtcgggacccgagtggtcaccaatgcgcaagcgcgg
gtacatgtttcggggcacgcctacgccggtgaactcctgttcctctacaacggtgtgcgt
ccgcgcaatgtgatgccggtgcacggcacgtggcggcacctgcgggccaatgcttcgttg
gcggtgagcaccggcgtgccgcccgagaacgtcatgttggccgagaacggggtgagtgtc
gacctggtcaacggagtcgcctccatcgcgggcgcggtgccggtgggcaagcggttcgtc
gacggtctggtcaccggtgacgtgggggagtcgaccctcggcgaaaggttgaccctgtca
gcgggtttcgtcgccgtcacggtggtggtgcatcgtggcaccgggcgagcggcaggaccc
gcgcacctgcactcgcggggtttctccgaggatcccaaggcgctcgatccggtcgccgag
aaggtggcccaggagctggagcggctcgccggtgatcaggtgaccgatcccgttcgcatc
gcacaagcggtgcggcgcaccgtcggcaagtgggtgggggagacctaccggcgccagccg
atgatcgtgccgaccgtcatcgagatctag
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