Mycolicibacterium neoaurum NRRL B-3805: MyAD_11840
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Entry
MyAD_11840 CDS
T05013
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MyAD_11840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myn03021
]
MyAD_11840
Transcription machinery [BR:
myn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MyAD_11840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
BNIP2
HTH_20
HC2
Motif
Other DBs
NCBI-ProteinID:
AMO08288
LinkDB
All DBs
Position
complement(2523015..2524418)
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AA seq
467 aa
AA seq
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MAATEASPATDEPVKATATKTAAKKAPAKKAPAKRAAKKAPAKKAPAKAASPRGKKDESG
EEVNLGEELDGAEDLDVEPGDDLEDVEIDDLETDDETDPADADSDEEAEGDDASPAAAKP
AKDGEDDIAEPTEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALL
NAEEEVELAKRIEAGLYATQLMTEKAAKGEKFTPTERRDMTWICRDGDRAKNHLLEANLR
LVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMAD
QARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPI
SLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGL
TDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacagaggcaagcccggcaaccgacgagccggtgaaggccaccgccaccaag
accgccgcgaaaaaggcgccggccaagaaggcaccggccaagcgggccgcgaagaaggca
ccggccaagaaggcaccggccaaggccgcatcgccgcgaggcaagaaggacgagtccggc
gaggaagtgaacctcggcgaggaactcgacggtgccgaggatctggacgttgagcccggc
gatgatctcgaggatgtcgagatcgacgacctggagaccgacgacgagaccgaccccgcc
gacgcggactccgacgaagaggccgaaggtgacgacgcctcccccgccgcggccaagccg
gccaaggacggcgaggacgatatcgccgagccgaccgagaaggacaaggcctcgggagac
ttcgtctgggacgaagaggagtccgaggcgctgcgccaggcccgcaaggacgccgagctc
accgcctcggcggactcggtgcgggcctacctgaagcagatcggcaaggtcgcgctgctc
aacgccgaggaggaggtcgagctcgccaagcgcatcgaggccggcctgtacgccactcag
ctgatgaccgagaaggccgccaagggtgagaagttcaccccgaccgagcgccgggacatg
acgtggatctgccgtgacggcgaccgcgccaagaaccacctgctggaggcgaacctgcga
ctggtggtgtcgctggccaagcgctacaccggacgcggcatggcgttcctggacctgatc
caggagggcaacctcggcctgatccgtgccgtcgagaagttcgactacaccaagggctac
aagttctccacctacgccacctggtggatccgccaggccatcacccgcgccatggccgac
caggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctgggccgc
atccagcgcgagctgcttcaggacctgggtcgcgaacccacgcccgaagagctggccaag
gagatggacatcacgccggagaaggtgctggagatccagcagtacgcgcgtgagccgatc
tcgctggaccagaccatcggcgacgagggcgacagccagctcggtgacttcatcgaggac
tccgaggccgtggtggccgtcgacgccgtgtccttcaccctgctgcaggatcagctgcag
tcggtgctggagacgctctccgagcgtgaggcgggcgtggtgcggctgcggttcggcctg
accgacggtcagccgcgcaccctcgacgagatcggccaggtctatggcgtcacgcgtgag
cgcattcgtcagatcgagtccaagacgatgagcaagctgcgccaccccagccgttcccag
gtgttgcgcgactacctggactag
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