Mycolicibacterium neoaurum NRRL B-3805: MyAD_13425
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Entry
MyAD_13425 CDS
T05013
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03030
DNA replication
myn03430
Mismatch repair
myn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MyAD_13425
03430 Mismatch repair
MyAD_13425
03440 Homologous recombination
MyAD_13425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myn03032
]
MyAD_13425
03400 DNA repair and recombination proteins [BR:
myn03400
]
MyAD_13425
Enzymes [BR:
myn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MyAD_13425
DNA replication proteins [BR:
myn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MyAD_13425
DNA repair and recombination proteins [BR:
myn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MyAD_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AMO06020
LinkDB
All DBs
Position
2877700..2881242
Genome browser
AA seq
1180 aa
AA seq
DB search
MGSSFVHLHNHTEYSMLDGAAKVKPMIAEAQRLEMPAIGMTDHGNMFGASEFYNVATDAG
IKPIIGIEAYIAPASRFDTKRVQWGDRSQKGDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHVDEALEAAAKWQDI
FGKENFFLELMDHGIEIERRVRDGLLEVGRKLGIPPLATNDCHYVTREASQTHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSAADMRALWDPQVPGACDSTLLIGERVQSYADVWTPRDR
MPVFPVPDGHDQQSWLTHEVMTGLAERRFPGAQVPQEYIDRADYEIKVICDKGFPAYFLI
VADLINYARSVNIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPDID
IDFDDRRRGEMVRYASEKWGSDRVAQVITFGTIKTKAALKDSARVNYGQPGFAIADRITK
ALPPPIMAKDIPLSGITDPKHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLVRNAGVH
ACAVIMSSEPLVDAIPLWKRPQDGAIITGWDYPSCESIGLLKMDFLGLRNLTVIGDALEN
IKANRGIDLDMDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILAETYGLIVYQEQIMFIAQK
VASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEAAVKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYQAEYMAGLLTSVGDDKDKAAIYLSDCRRLGITVLPPDV
NESVHNFASVGDDIRYGLGGVRNVGANVVQSIINGRNEKGKYTDFSDYLNKIDITACNKK
VTESLIKAGAFDSLGHPRKGLFLVHADAVDSVLGTKKAEAIGQFDLFGGGDADTGMESVF
TIPVPEGEWEDKHKLALEREMLGLYVSGHPLDGVAHLLAAHVDTQIPSILEGDIANDTQV
RIGGILASVNRRVNKNGLPWASAQVEDLTGGIEVLFFPQTYSAFGADIADDAVVIVGAKV
AIRDDRISLIANDLVVPDFSNAQGDRPVAVSLPTRQCTVDKVTALKQVLARHPGTSQVHL
RLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctcgttcgtgcatctgcataaccacaccgaatactcgatgctcgacggcgcg
gccaaggtcaagccgatgatcgccgaggcgcaacgcctcgagatgccggccatcggaatg
accgaccacggcaacatgttcggggccagcgagttctacaacgtcgccaccgatgccggg
atcaagccgatcatcggtatcgaggcctacatcgcccccgcttctcgattcgataccaag
cgcgtgcagtggggtgatcgcagccagaagggtgacgacgtctccggtagtggtgcctac
acccacatgacgatggtcgccgagaatgcgaccggtctgcgcaacctgttcaagctgtcc
tcgctggcctcgttcgagggccagctgggcaagtggtcgcggatggacgccgagctgatc
gccgagcacgccgagggcatcatcgccacgaccgggtgcccctccggtgaggtgcagacc
cggttgcggctcgggcacgtcgacgaggcgctggaagccgccgccaaatggcaggacatc
ttcggtaaggagaatttcttcctggagctgatggaccacggcatcgagatcgagcgccgg
gtccgcgacgggctgctcgaggtgggccgcaagctcggcatcccgccgttggccaccaac
gactgccactacgtcacccgcgaggcctcgcaaacccacgaggcgctgctgtgcgtgcag
accggcaagacgctgtcggatcccacccggttcaagttcgacggtgacggctactacctg
aagtcggccgcggacatgcgggcgctgtgggatccgcaggtgcccggtgcctgcgattcg
accctgctgatcggcgagcgcgtgcagtcctacgccgatgtgtggaccccccgtgaccgg
atgccggtcttcccggttcccgacggccacgatcagcagtcctggctgacccacgaggtg
atgaccgggctggcggagcgacggttcccgggtgcgcaggttccccaggagtacatcgac
cgcgccgactacgagatcaaggtcatctgtgacaagggcttcccggcgtacttcctgatc
gtcgccgacctgatcaactacgcccgctcggtcaacatccgggtcgggcccggccgtggg
tcggcggccggttcgctggtggcctacgccatgggcatcacgaacatcgacccgatcccg
cacggcctgctcttcgagcggttcctcaaccccgagcgtccgtcggcacccgatatcgat
atcgacttcgacgaccgccgccgcggtgagatggtgcgctacgccagcgaaaagtggggt
agcgaccgggtcgcgcaggtcatcaccttcggcaccatcaagaccaaggccgcgctgaag
gactcggctcgggtcaactacggccagcccggtttcgccatcgccgaccgcatcaccaag
gcgctgccgccgccgatcatggccaaggacatcccgctgtcgggtatcaccgaccccaag
cacgagcggtacaaggaggccgccgaggtacgggggctcatcgacaccgatcccgatgtg
cgcaccatctacgagaccgcccgcggcctggagggtctggtccgcaacgccggcgtgcac
gcctgcgcggtgatcatgagctccgaacccctcgtcgacgcgatcccgctgtggaagcgc
ccgcaggacggcgccatcatcaccggctgggattacccctcgtgtgagtccatcggcctg
ctgaagatggacttcctcggtctgcgcaacctcaccgtcatcggtgacgcgctggagaac
atcaaggccaaccgcggtatcgatctggacatggatcatctcccgctcgatgatccggcg
acctatgagctgctgtcccgcggtgacaccctcggggtgttccagctcgacggcgggccg
atgcgtgacctgctgcgccgtatgcagccgaccggattcaacgacatcgtggccgtgctg
gcgctgtaccggccgggcccgatgggcatgaacgcgcacaacgactacgccgaccggaag
aacggtcgccagccgatcaagccgatccatccagagctcgaagagccgctcaaggagatc
ctggccgagacctatggcctgatcgtctaccaagagcagatcatgttcatcgcccagaag
gtcgcgtcctacaccatgggcaaggccgatgcgctgcgaaaagccatgggcaagaagaag
ctcgaggtgctcgaggccgagtacaagggcttcaaggagggcatgacggccaacgggttc
tccgaggccgcggtgaaggcgctgtgggacaccatcctgccgttcgccgggtacgcgttc
aacaagtcgcacgccgccggttacgggctggtgtcgttctggactgcctatctcaaggcc
aactaccaggccgagtacatggcaggtctgctgacctcggtcggtgacgacaaggacaag
gccgccatctacctgtcggactgccgccggctcggcatcaccgtgctgccgcccgacgtc
aacgaatccgtgcacaacttcgcctcggtcggcgacgatatccgctacggcctcggcggg
gtgcgcaatgtcggcgccaacgtggtccagtcgatcatcaacggccgcaatgaaaaaggg
aagtacaccgacttctcggattatctgaacaagatcgacataacggcatgcaacaagaag
gtgaccgagtccctgatcaaggcgggcgccttcgactcgctggggcatccccgcaagggc
ctgttcctggtgcacgccgatgcggtggattcggtgctcggtaccaagaaggccgaggcc
atcggccagttcgatctgttcggcggcggggacgccgacaccgggatggagtcggtgttc
accatcccggtgcccgagggtgagtgggaggacaagcacaagctggcattggaacgagag
atgttgggtctctacgtgtccggccatcccctcgacggtgtcgcccacctgctcgccgcg
catgtcgacacccagatcccgtcgatcctggaaggcgatatcgccaacgacacccaggtg
cgcatcggcggaatcctcgcctcggtgaaccgccgggtcaacaagaacggtctgccgtgg
gcctcggcgcaggtggaggacctgaccggcggtatcgaggtgctgttcttcccgcagacc
tattcggcgttcggtgccgatatcgccgatgacgcggtggtcatcgtcggtgcgaaggtg
gccatccgtgacgaccggatctcgctgatcgccaacgaccttgtggtgccggacttctcg
aatgcccagggtgaccggccggttgcggtgagcctgccgacgcggcagtgcacggtggac
aaggtgaccgcgctcaagcaggtgctcgcgcggcaccccggcacctcgcaggtgcatctg
cggcttatcagcggtgaacggatcaccaccctggagctcgaccagtcgctgcgggtcacc
ccgtcctcggcgttgatgggtgatctgaaggcgctgctcggccccggttgtctgggcggc
tga
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