Mycolicibacterium neoaurum NRRL B-3805: MyAD_17120
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Entry
MyAD_17120 CDS
T05013
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
myn
Mycolicibacterium neoaurum NRRL B-3805
Pathway
myn03030
DNA replication
myn03410
Base excision repair
myn03420
Nucleotide excision repair
myn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MyAD_17120
03410 Base excision repair
MyAD_17120
03420 Nucleotide excision repair
MyAD_17120
03440 Homologous recombination
MyAD_17120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myn03032
]
MyAD_17120
03400 DNA repair and recombination proteins [BR:
myn03400
]
MyAD_17120
Enzymes [BR:
myn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MyAD_17120
DNA replication proteins [BR:
myn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MyAD_17120
DNA repair and recombination proteins [BR:
myn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MyAD_17120
NER (nucleotide excision repair)
GGR (global genome repair) factors
MyAD_17120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_A_exo1
NYN_YacP
CNV-Replicase_N
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AMO06614
LinkDB
All DBs
Position
complement(3652803..3655541)
Genome browser
AA seq
912 aa
AA seq
DB search
MSPAKTESTAKNPAGDASTDGQKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYG
FTAMLINLLRDEQPSHIAAAFDVSRQTFRKEKYPEYKEGRSATPDEFRGQIDITKEVLGA
LGITVLAEPGFEADDIIATLATQAEDAGYRVLVVTGDRDSLQLVSDDVTILYPVKGVSEL
TRFTPEAVAAKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEHGSLQGLVDN
VDKVKGKVGDALRANLSSVVLNRELTELVKNVPLPHTPDTLRMLPWDRDQIHRLFDDLEF
RVLRDRLFDTLASADPEVDQGFDVRGGALAPGELAAWLAEHSLGNRFGVAVVGTHLAFDS
DATALAIVANDGDGRYIDTATIHPDDEAALAAWLADPGPPKALHEAKLAMHDLEGRGWKL
AGVTSDTALAAYLVRPGQRSFALDDLSLRYLKRELRAENPEQQQLSLLDDNEGVDEQAVQ
AVLLRAAAVMDLADALDEELARIDSSSLLERMELPVQRVLAELESTGIAVDVDFLRGLQN
EFGDYIRDAAEAAYAVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDADALQGLF
DKTGHPFLQHLLAHRDATRLKVTVDGLLASTAADGRIHTTFNQTIAATGRLSSTEPNLQN
IPIRTEAGRRIRDGFVVGEGYTELMTADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFV
ASRAFDVPIDEVTPELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKEQMDQYFDRFGG
IRDYLRDVVDQARKDGYTSTVLGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIK
VAMINVDQAIKSAGLTSRMLLQVHDELLFEVSEGERGELEKLVREHMGNAYPLDVPLEVS
VGFGRSWDAAAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcgaagaccgagagcaccgccaagaatccggccggcgacgcgtcgaccgat
ggtcagaagccgaccctgatgctgttggacggcaactcgctggccttccgtgctttctat
gcgctgcccgccgagaacttcaagacccagggcggtctgaccaccaatgcggtctacgga
ttcaccgcgatgctgatcaacctgctccgcgacgagcaacccagccatatcgccgccgcg
ttcgacgtctcccggcagaccttccgcaaggagaagtacccggagtacaaggagggccgc
tcggccactcccgacgagttccgcgggcagatcgacatcaccaaggaggtgctcggtgcg
ctgggcatcaccgtgctggccgagcccggattcgaggccgacgacatcatcgccaccttg
gccacccaggccgaggacgccgggtaccgggtgctggtcgtcaccggagaccgggactca
ctgcagttggtgagtgacgatgtcaccatcctgtacccggtgaagggcgtcagtgaactg
acccggttcaccccggaagcggtggcggcgaagtacggcctcactcccgcgcagtacccg
gatttcgccgcgctgcgcggcgatccgagtgacaacctgccgggcatcccgggggtgggg
gagaagaccgcgaccaagtggatcgtcgagcacggctccctgcagggtctggtcgacaac
gtggacaaggtcaagggcaaggtcggcgacgcgctgcgcgccaacctgtcctcggtggtg
ctcaaccgggagctcaccgagctggtcaagaacgtgccactgccgcacaccccggacacc
ctgcggatgctgccctgggaccgcgatcagatccaccggctgttcgacgacctggagttc
cgggtgctgcgcgatcggctcttcgacacgctggcctcggcggacccggaggtcgaccag
ggtttcgacgtgcggggcggggcgttggcgcccggcgagctggcggcctggctggccgag
cacagcctgggcaaccggttcggtgtcgccgtggtcggtacgcacctggccttcgacagt
gatgccaccgcgctggcgatcgtcgccaacgacggtgacgggcgctatatcgacaccgcg
acgatccatcccgatgacgaagccgccctggcggcctggctggccgacccgggcccgccg
aaggcgctgcacgaggccaagctcgccatgcacgacctggagggtcgcggctggaagctg
gccggcgtcacctccgataccgcgctggccgcctacctggtgcggccgggccagcgcagc
ttcgcactcgatgacctgtcgctgcgctatctcaagcgcgagctgcgcgccgaaaacccc
gagcaacaacagctttcgctgctcgatgacaacgagggcgtggacgagcaggccgtgcag
gcagtgctgctgcgggcggcagcggtgatggacctggccgatgcgctcgacgaagagctg
gcccggatcgactcttcctcgctgctggaacgcatggagctgccggtgcagcgggtgctc
gccgaactggagagcaccgggatcgcggtcgacgtggacttcctgcgcgggctgcagaac
gagttcggcgactacatccgcgacgcggccgaggctgcctacgcggtgatcggcaagcag
atcaacctcgggtcgcccaagcagctgcaggtcgtgctgttcgacgagctcgagatgccc
aagacgaagaagaccaagaccggctacaccaccgatgccgatgcgctgcaggggcttttc
gacaagaccgggcatccgttcctgcagcacctgctggcccatcgggatgccacccggctc
aaggtcaccgtcgacggactgttggcatcgacggccgcagacggccgaattcacaccacg
ttcaaccagaccatcgcggccaccggccggctctcgtcgaccgagccgaacctgcagaac
atcccgatccgcaccgaggccggccgtcggatccgcgacgggtttgtcgtgggcgagggt
tacaccgaactgatgacggccgattacagccagatcgagatgcgcatcatggcgcatctg
tcgcgggacgagggcctgatcgaggcgttcaacaccggtgaggatctgcactcgttcgtc
gcgtcacgggccttcgacgtgccgatcgatgaggtcaccccggagctgcgccgccgggtc
aaggcgatgtcctacggcctggcctacgggctgagcgcctacggtctctcggcgcagctg
aagatcagcaccgaagaggccaaagaacagatggaccagtacttcgaccggttcggcggc
atccgcgactacctgcgtgatgtggtcgaccaggcccgcaaggacggttacacctccacg
gtgctgggccgccgccgctacctgcccgaactggacagcagcaaccgcaatgtccgggag
gcggccgagcgggccgcgctcaacgccccgatccagggcagcgccgccgacatcatcaag
gtggccatgatcaacgtcgaccaggccatcaaatcggccgggctgacatcccggatgctg
ctgcaggtgcacgacgagctgctgttcgaggtctcagaaggggaacggggggagctcgag
aagctggtgcgcgaacacatgggcaacgcctacccgctcgacgtgccgctggaggtttcg
gtcggcttcggacgcagctgggacgccgcggcgcactag
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