Mycobacterium intracellulare subsp. yongonense: OEM_01040
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Entry
OEM_01040 CDS
T02732
Name
(GenBank) transcriptional regulator, Crp/Fnr family protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo02020
Two-component system
myo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OEM_01040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OEM_01040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myo03000
]
OEM_01040
Transcription factors [BR:
myo03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
OEM_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
HTH_24
GntR
MarR_2
HTH_3
Sigma70_r4
HTH_IclR
wHTH-PRTase_assc
MarR
CysG_dimeriser
HTH_ParB
DUF977
HTH_26
TrmB
NirdL-like_HTH
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
AGP61640
LinkDB
All DBs
Position
104204..104881
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AA seq
225 aa
AA seq
DB search
MDDILARAGIFQGIAPDAVAALARHLQHVSFPRRRTVFVEGEAGDDLFVILAGSVKIRHQ
TGDGRETVFAVLGPGDVFGELALFDPGPRTSTVITLTEVETVRMDRHALRTWMAERPEIS
EQLLRVLARRLRHTNNTLCDLIFTDVPARVAKQILDLAMRFGTNSGGPVRVEHHLTQKEL
AQLVGSSRETVNKALSDFTQRGWIRQQGKALIIDQPAKLARRARA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacattttggcgcgagccggtatcttccagggaattgcacccgacgcggtcgcc
gcgttggcccgccacctgcagcacgtctccttcccgcgcaggcgcacggtcttcgtcgag
ggcgaggcgggcgacgacctcttcgtgatcttggcgggttcggtgaagatccgtcatcag
accggcgacggccgtgaaaccgtcttcgcggtgctgggccccggcgacgtgttcggcgag
ctcgcactgttcgatccgggcccgcgaacctcgacggtgatcacgctgaccgaggtggag
accgtcaggatggaccgccacgccctgcgaacatggatggccgaacgccccgaaatctcc
gagcagctcctacgggtgctggcgcgtcggctccggcacaccaacaacacgctgtgcgac
ttgatcttcaccgatgtgcccgcccgggtcgccaagcaaatcctcgatctggcaatgcgt
ttcggtaccaacagcgggggaccggtgcgcgtcgagcatcacctcacgcaaaaggagctc
gctcaactcgtcggttcctcgcgcgaaacggtcaacaaggcgctatcggatttcacccag
cgcggctggatccggcagcagggcaaggccctcattatcgaccagcccgcgaagctggcc
cgccgcgcacgggcctag
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