Mycobacterium intracellulare subsp. yongonense: OEM_04370
Help
Entry
OEM_04370 CDS
T02732
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myo03032
]
OEM_04370
03400 DNA repair and recombination proteins [BR:
myo03400
]
OEM_04370
Enzymes [BR:
myo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OEM_04370
DNA replication proteins [BR:
myo03032
]
Prokaryotic type
DNA Topoisomerases
OEM_04370
DNA repair and recombination proteins [BR:
myo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OEM_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGP61973
LinkDB
All DBs
Position
434812..437625
Genome browser
AA seq
937 aa
AA seq
DB search
MADPKLKDSAGGGNGSRRRLVIVESPTKARKLAGYLGSSYIVESSRGHIRDLPRAAADVP
AKYKSEPWARLGVNVDHDFEPLYIISPEKKSTVTELKGLLKDVDELYLATDGDREGEAIA
WHLLETLKPNIPVKRMVFHEITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDIVAQLDASVSDPQASPPTFS
ARLTNVDGLRVATGRDFDSLGQLRKADEVTILDEASATELAAGLRGAQLSVASVEEKPYT
RRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSAINAARN
QARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELI
WQRTVASQMADARGTTLSLRIGGRSGERQVVFSASGRTITFPGFLKAYVETVDELAGGEA
DDAESRLPQLTQGQRLDAIELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSIIKT
IQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGQERRTDW
LNNFYFGGEHGVADSVARSGGLKKLVGVNLEGIDAREVNSIKLFDDEQGRPVYVRVGKNG
PYLERMVTGDDGERTPQRANLNDSLTPDELTLELAEQLFATPQEGRVLGVDPATGHEIVA
KDGRYGPYVAEVLPEPPPGDDDGGAAPAKKGKKPTGPKPRTGSLLRTMDLQTVTLEDALR
LLSLPRVVGVDPESGEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLEEALKIYAEPK
RRGRQGAAAPPLRELGADPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERAA
DLLADRRARGPAKRPAKKAARKSPAKKSAAKKTAKRS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaactgaaggacagcgccggcggcggcaacggaagccgccggcgactc
gtgattgtcgagtcgcccactaaggcgcgcaaactggccgggtacctgggctccagctac
atcgtcgagtcgtcgcgcggccacatccgcgacctgccccgggccgccgccgacgtgccc
gccaagtacaagtcggagccgtgggccaggctgggcgtgaacgtcgatcacgacttcgaa
ccgctctacatcatcagcccggagaagaagagcaccgtcaccgagctcaagggcctgctc
aaggacgtcgacgagctctatctcgccacggatggcgaccgcgagggcgaagccatcgcc
tggcacctgctggagaccctcaagcccaacatcccggtcaagcggatggtgttccacgag
atcaccgagccggcgatcctggaggccgccgaaaacccccgcgacctcgacatcgatctc
gtcgacgcgcaggagacccgccgcatcctggaccgcctgtacggctacgaggtcagcccg
gtgctgtggaagaaggtcgcgcccaagctgtcggcgggccgggtccagtcggtggccacc
cggatcatcgtgcagcgcgagcgcgaccgcatggcgtttcgcagcgcgtcctactgggac
atcgtggcccagctcgacgccagcgtgtccgacccgcaggcgtcgccgcccaccttctcc
gcccggctgaccaatgtcgacggcctgcgcgtcgccaccggacgcgacttcgactcgctg
ggacagctgcgcaaggccgacgaggtcaccatcctcgacgaagcaagcgcgaccgagttg
gccgccgggctgcgcggcgcccagctgtccgtcgcctcggtcgaggagaagccctacacg
cgccggccgtacgcgccgttcatgacgtcgacgctgcagcaggaggccggccgcaagctg
cggttctcctccgagcgcaccatgagcatcgcccagcggctctacgaaaacggctacatc
acctatatgcgtaccgactcgaccacgttgtcgcagtcggcgatcaacgccgcccgcaac
caggcgcgtcagctctacggcgaggagtacgtctcgccgtccccacgccagtacacccgc
aaggtgaagaacgcccaggaggcgcacgaggcgatccggcccgccggcgagacgttcgcc
accccggacgcggtgcgacgcgaactcgacggcgacgaattccggctctacgagctgatc
tggcaacgcacggtggcctcgcagatggccgacgcgcgcggcaccacgctgagcctgcgg
atcgggggccgctccggcgagcgtcaagtggtgttctccgccagcggtcggaccatcacg
ttccccggcttcctgaaggcctacgtggagacggtggacgagttggctggcggcgaggcc
gacgacgccgagagccggctgccgcagctcacccagggccagcggctggacgccatcgaa
ctcacgcccgacggccacgccaccaacccgccggcccgctataccgaggcgtcgttggtc
aaggcgctcgaggaactgggcatcggccgcccgtcgacgtattcgtccatcatcaagacc
atccaggaccgtggctacgtgcacaagaagggcagcgccctggtgccctcctgggtcgcg
ttcgccgtaaccggtttgctggagcagcatttcggccggctggtcgactacgacttcacc
gccgcgatggaggacgagctcgacgcgatcgcctcgggccaggagcggcgcaccgactgg
ctcaacaacttctacttcggcggcgagcacggggtggccgattcggtggcccggtccggc
ggcctgaagaagctcgtcggcgtcaacttggaaggcatcgacgcccgagaagtcaactcc
atcaagctctttgacgacgagcagggccgtcccgtctacgtccgggtgggcaagaacggg
ccgtacctggagcgcatggtgaccggcgacgacggcgagcgcacgccgcagcgggccaac
ctcaacgactcgctgacccccgacgaattgaccctcgagctggccgagcagctgttcgcc
acgccgcaggagggacgggtgctgggcgtggacccggcgacgggccacgaaatcgtcgcc
aaggacggcagatacggcccgtacgtggccgaggtcctgccggagccgccacccggcgac
gacgacggcggcgccgcacccgcgaagaagggcaagaagcccaccggtcccaaaccccgc
accgggtcgctgctgcgcaccatggatttgcagacggtcacgctcgaggacgcgctgcgg
ctgctgtcgctgccccgggtggtcggtgtcgaccccgaatccggcgaggagatcaccgcg
cagaacggccgctacggcccatacctgaagcgcggcaccgattctcgctcgctggccacc
gaggagcagatgttcgacatcaccctcgaggaagcgttgaagatctacgccgagcccaaa
cgccgcggccgccagggcgccgccgcgccgccgctgcgtgagctgggcgccgaccccgcg
accggcaagccgatggtgatcaaggacggccggttcgggccgtacgtcaccgacggcgag
accaacgcgagcctgcgcaagggcgacgacgtgctgtcgatcaccgacgagcgggccgcc
gacctgctggccgaccgccgggcccgcggcccggcgaagcgtcccgccaagaaggccgcc
cgcaagtcaccggccaagaagtcggctgccaagaagaccgccaagcgcagctag
DBGET
integrated database retrieval system
