Mycobacterium intracellulare subsp. yongonense: OEM_08710
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Entry
OEM_08710 CDS
T02732
Name
(GenBank) DNA or RNA helicase of superfamily protein II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OEM_08710
09124 Replication and repair
03420 Nucleotide excision repair
OEM_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myo03021
]
OEM_08710
03400 DNA repair and recombination proteins [BR:
myo03400
]
OEM_08710
Enzymes [BR:
myo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OEM_08710
Transcription machinery [BR:
myo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OEM_08710
DNA repair and recombination proteins [BR:
myo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OEM_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Cox20
Motif
Other DBs
NCBI-ProteinID:
AGP62407
LinkDB
All DBs
Position
complement(847941..849590)
Genome browser
AA seq
549 aa
AA seq
DB search
MSDGPLIVQSDKTVLLEVEHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGW
HLRDYQQMATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRE
LIARTSLTEDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMMYATAEPEERYKLCSTVHTKIAVVKSILAKHPGEQTLVIGAYLD
QLDELGAELGAPVIQGSTRTKEREELFDGFRRGEVNTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggaccgttgatcgtgcagtcagacaagacggtgctgctcgaggtggagcac
gaacaggccggcgcggcgcgggccgcgatcgcgccgttcgccgagctggaacgcgcaccc
gagcacgtgcacacctaccgcatcacaccgctggcactgtggaacgcccgcgccgccggg
cacgacgccgaacaggtcgtcgacgcgctggtctccttctcccgctacgcggtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcccgctacggccgcttacagctggtgaaa
aacccggcgcacggcctgacgctggtgagcctggaccgcgcggtgctcgaggaagtgttg
cgcaacaagaagatcgccccgatgctcggcgcccggatcgacgacgacacggtcatcgtc
cacccgagcgagcgcggccgggtcaagcaaatgctactcaagatcggttggcccgcagag
gatctcgctggctacgtcgacggcgaggcgcatccgatcagcctggcccaggacggctgg
cacctgcgcgactaccagcagatggccaccgactcgttctggtcgggtggctccggcgtg
gtggtgcttccctgtggcgccggcaagaccttggtgggcgccgccgcgatggcgaaagcc
ggtgcgacaacgctgattttggtcaccaacatcgtcgcggcgcggcagtggaagcgtgag
ctgatcgcccgcacctcgctcaccgaggacgagatcggcgaatactccggtgagcgcaag
gagattcggccggtgaccatctcgacgtaccagatgatcactcgccgcaccaagggcgag
taccgccacctcgagctcttcgacagccgcgactgggggctgatcatctacgacgaggtc
cacttgttgccggcgccggtgtttcggatgaccgccgatctgcaatccaagcggcgcctg
gggctgaccgccacgctggtccgcgaggacggccgcgagggcgacgtgttctccctgatc
ggcccgaaacgctatgacgcgccgtggaaggacatcgaggcgcaggggtggatcgcaccg
gcggagtgcgtcgaggtgcgggtcaccatgaccgacaacgagcggatgatgtacgccacc
gccgagcccgaagagcgctacaagctgtgctcgacggtgcacaccaaaatcgctgtggtc
aaatcgattctggcgaagcatccgggtgagcagaccctggtgatcggcgcgtacctcgat
cagctcgacgagctgggcgccgagctgggcgccccggtgatccagggctccacgcggacc
aaggaacgcgaggagctgttcgacggcttccgccgcggcgaggtgaacacgctggtggtt
tccaaggtcgccaacttctccatcgacttgccggaagccgcggtggccgtgcaggtttcg
ggaaccttcggctcgcgccaggaagaggcgcagcggctgggccggttgctgcggcccaag
gccgacggcggcggcgccatcttctattccgtggtggcgcgcgacagcctggacgccgaa
tacgccgcccaccggcagcgtttcctggccgagcagggttacggctacatcatccgcgac
gccgacgacctcctgggtccggccatctag
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