Mycobacterium intracellulare subsp. yongonense: OEM_29050
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Entry
OEM_29050 CDS
T02732
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OEM_29050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myo03400
]
OEM_29050
DNA repair and recombination proteins [BR:
myo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OEM_29050
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OEM_29050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_19
AAA_5
Glyco_trans_4_4
DUF87
Helicase_RecD
HEM4
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
AGP64440
UniProt:
S4ZCG7
LinkDB
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Position
complement(3099570..3101741)
Genome browser
AA seq
723 aa
AA seq
DB search
MAFATEHPVVAHSEYRPAEEAVAGLVRAGGRFEVVSPHDPAGDQPAAIDELERRIKAGER
DVVLLGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYY
DYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQS
YLDRSVELRVGNEVPRDGLLRLLVDVQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRI
EFFGDEIEALYYLHPLTGDVIRQVDSLRIFPATHYVAGPERMAHAISTIEEELAARLAEL
EGQGKLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDARGPGSPPATLLDYFPEDFL
MVIDESHVTVPQIGGMYEGDMSRKRNLVEYGFRLPSACDNRPLTWEEFADRVGQTVYLSA
TPGPYELSQSGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIGEIRKRTDADQRVLVTTL
TKKMAEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPE
VSLVAILDADKEGFLRSSRSLIQTIGRAARNVSGEVHMYADTITDSMKEAIDETERRRAK
QIAYNEAHGIDPQPLRKKIADILDQVYREADDTETVEIGGSGRNASRGRRAQGEPGRAVS
AGVFEGRDTTSMPRAELADLIKDLTAQMMAAARDLQFELAARFRDEIADLKKELRGMDAA
GLK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgccacggaacatccggtagtcgcccattcggaatatcgcccggccgaagag
gccgtggcggggttggtacgcgccggcggccgcttcgaggtcgtcagcccgcacgacccc
gccggggaccagccggcggccatcgacgagctggagcgccggatcaaggcgggggagcgc
gatgtggtgctgctcggtgccaccggcaccgggaagtcggccaccaccgcctggctcatc
gagcgcctgcagcggcccaccctggtgatggcacccaacaagacgctggccgcccagctg
gccaacgagctgcgggagatgttgccgcacaacgccgttgagtacttcgtgtcgtactac
gactactaccagcccgaggcctacatcgcgcagaccgacacctacatcgagaaggacagc
tcgatcaacgacgacgtcgagcgcttgcggcactccgcgacgtcgtcgctgctgtcgcgg
cgcgacgtggtcgtggtggcgtcggtgtcgtgcatctacggcctgggcaccccgcagtcg
tacctggatcgctcggtggaactgcgggtcggcaacgaggtgccccgggacgggttgctg
cggctattggtcgacgtccagtacacccgcaacgacctgtccttcacccgcggctcgttc
cgggtgcgcggcgacacggtcgagatcatcccgtcctacgaagagctggcggtgcgcatc
gagttcttcggcgacgagatcgaggcgctgtactacctgcacccgctgacgggcgacgtg
atccgccaggtcgactcgctgcgcatcttcccggccacccattacgtggccggccccgag
cggatggcccacgccatctcgacgatcgaagaggaactggccgcccggctggccgagctg
gagggtcagggcaagctgctcgaggcgcagcgcctgaggatgcgcaccaactacgacatc
gagatgatgcgccaggtcgggttctgctcgggcatcgagaactactcccgccacatcgac
gcccgggggccgggctcgccgccggcgaccctgctcgactacttcccggaagacttcttg
atggtcatcgacgagtcgcacgtcaccgtgccgcagatcggcggcatgtacgagggcgac
atgtcgcgcaagcgcaacctggtcgaatacgggttccggttgccgtcggcgtgcgataac
cgcccgctgacgtgggaggagttcgccgaccgggtcgggcagacggtgtatctgtcggcc
accccgggcccctatgagctaagtcagtccggcggcgagttcgtcgagcaggtcatccgg
cccaccggcctggtggacccgaaggtggtggtcaaacccacgaaggggcagatcgacgac
ctgatcggcgagatccgcaagcgcaccgacgccgaccagcgggtgctggtcaccacgctc
accaagaagatggccgaggacctcaccgactacctgctcgagatgggcatccgggtgcgc
tatctgcactcggaggtcgacacgctgcgccgggtggaattgctgcgccagctgcggctc
ggcgagtacgacgtgctggtcggcatcaacctgctgcgcgagggcctggacctgccggag
gtgtcgctcgtcgccatcctggatgccgacaaagagggcttcctgcggtcatcgcgcagc
ctgatccaaaccatcggtcgcgccgcccgcaacgtctccggcgaagtgcacatgtacgcc
gacacgatcaccgactcgatgaaggaagccatcgacgagaccgaacggcgccgggcgaag
cagatcgcctacaacgaggcccacgggatcgacccgcaaccgctgcgcaagaagatcgcc
gacatcctcgaccaggtctatcgcgaggcggacgacaccgaaacggtggagatcggcggg
tcagggcggaatgcgtcccgcggtcggcgcgcgcagggcgagccgggccgcgccgtcagc
gccggggtgttcgagggccgcgacacgaccagcatgccccgcgccgaactggccgacctg
atcaaggacctgaccgcgcagatgatggccgccgcccgggatttgcagttcgagctggcc
gcgcggttccgggacgagatcgccgacctgaagaaggaactgcgcgggatggacgccgcc
ggcctgaaatga
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