Mycobacterium intracellulare subsp. yongonense: OEM_29910
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Entry
OEM_29910 CDS
T02732
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo03030
DNA replication
myo03430
Mismatch repair
myo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OEM_29910
03430 Mismatch repair
OEM_29910
03440 Homologous recombination
OEM_29910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myo03032
]
OEM_29910
03400 DNA repair and recombination proteins [BR:
myo03400
]
OEM_29910
Enzymes [BR:
myo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OEM_29910
DNA replication proteins [BR:
myo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OEM_29910
DNA repair and recombination proteins [BR:
myo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OEM_29910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AGP64526
LinkDB
All DBs
Position
complement(3196041..3199574)
Genome browser
AA seq
1177 aa
AA seq
DB search
MNHSSFVHLHNHTEYSMLDGAAKIAPMLAEVDRLQMPAVGMTDHGNMFGASEFYNAATKA
GIKPIIGVEAYIAPASRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAETPTGLRNLFKL
SSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE
IFGADNYFLELMDHGLSIEQRVRDGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRRIWDDEVPGACDSTLLIAERVQPYDEVWAPRD
RMPIFPVPEGHDQASWLHHEVMEGLARRFPSGVGQDYIDRAEYEIKVICDKGFPSYFLIV
ADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPAHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNI
KANRGIDLDLESVPLDDGPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGTDIRFGLGAVRNVGANVVGSLISTRNGKGKFTDFSDYLNKIDIAACNKKV
TESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAIGQFDLFGGDDGCTEAVFTIK
VPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDSVVLINAKVAIR
DDRISLIANELVVPDFSSAQVNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLRLI
SGDRITTLELDASLRVTPSPALMGDLKELLGPGCLGG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgtccttcgtgcacctgcataaccacaccgagtactcgatgttggacggt
gccgcgaagatcgcgccgatgctcgccgaggtggaccggctgcaaatgcccgcggtcggg
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggcgaccaaggcc
gggatcaagccgatcatcggcgtcgaggcctacatcgcgcccgcgtcgcggttcgacacc
cggcggatcctgtggggtgaccccggccagaagtccgacgacgtctcgggcagcggctcc
tacacgcacatgacgatggtggccgagacgcccaccggcctgcgcaacctgttcaagctg
tcctcgttggcgtcgttcgagggccagctcggcaagtggtcgcggatggacgccgagatc
atcgccgaacacgccgagggcatcatcgccaccaccggctgcccctcgggggaggtgcag
acccggctgcgcctcggtcacgaccgcgaggcgctggagtcggcggccaagtggcgcgag
atcttcggcgccgacaactacttcctcgagctgatggaccacgggctgtccatcgagcag
cgggtccgcgacgggctgctcgagatcggccgcaagctgggcattccgccgctggccacc
aacgactgccactacgtcacccgcgacgccgcccacaaccacgaggcgctgttgtgcgtg
cagaccggcaagacgctctcggaccccaaccggttcaagttcgacggcgacggctactac
ctgaagtcggccgccgagatgcgccgcatctgggacgacgaggtccccggcgcctgcgac
tccaccctgttgatcgccgagcgggtgcagccctacgacgaggtctgggcgccgcgcgac
cggatgccgatcttcccggtgcccgaggggcacgaccaggcgagctggctgcaccacgag
gtgatggaggggctggcgcgccgcttcccgtccggcgtcgggcaggactacatcgaccgg
gccgagtacgagatcaaggtcatctgcgacaagggtttcccgtcgtactttttgatcgtc
gccgacctgatcaactacgcccggtcggtcgacatccgggtggggcccgggcgcggttcg
gcggcggggtcgctggtggcctacgcgctgggcatcaccaacatcgatcccatcccgcac
ggcctgctgttcgagcggttcctcaacccggaacgtccgtccgcgcccgacatcgacatc
gacttcgacgaccgccgtcgcggcgagatggtgcgctacgccgccgacaagtggggctcc
gaccgcgtcgcccaggtcatcaccttcggcaccatcaaaaccaaagcggccctgaaggat
tcggcacgcatccactacggccagcccggcttcgccatcgccgaccggatcaccaaggcg
ctgccgccgccgatcatggccaaggacatcccgctctcggggatcaccgatcccgcccac
gagcggtacaaggaggccgccgaggtccgcggactgatcgagaccgaccccgacgtgcgc
accatctaccagaccgcgcgtgggctggaaggcctgatccgcaacgccggggtgcacgcg
tgtgcggtgatcatgagcagcgagccgctgaccgaggccattccgctgtggaagcggccg
caggacggcgccatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aagatggatttcctgggcctgcgcaacctgacgatcatcggcgacgccctggataacatc
aaggccaacaggggaattgacctcgacctggaatccgtcccgctggatgacggacccacc
tatgagctgttgggccgcggcgacaccctgggcgtgttccagctcgacggcgggcccatg
cgcgatctgctgcgccgcatgcagcccaccgagttcaacgacatcgtcgcggtgctggcg
ctgtaccgccccggcccgatgggcatgaacgcccacaacgactacgccgaccgcaagaac
ggccgccagccgatcaagccgattcaccccgagctcgaggagccgctgcgcgagatcctt
tccgagacttacggtttgatcgtctaccaagagcagatcatgttcatcgcccagaaggtc
gcctcctacaccatgggcaaggccgacgcgctgcgcaaggccatgggcaagaagaagctc
gaggtgctcgaggccgagtacaagggtttctacgagggcatgaccgccaacggcttctcc
gaaaaagcggtgaaggcgttgtgggacaccatccttccgttcgccgggtacgcgttcaac
aaatcacacgcggccggctacggcctggtctcgtactggaccgcctacctgaaggccaac
tatccggccgagtacatggccgggctgctgacctcggtgggtgacgacaaggacaaggcc
gccgtctacctggccgactgccgcaagctgggcatcacggtgttgccgcccgacgtcaac
gaatcgctggtgaacttcgcctcggtcggaacggacatccgtttcgggctgggtgcggtg
cgcaacgtcggcgccaacgtggtgggttcgctgatcagcacccgcaacggcaagggcaag
ttcaccgacttctcggactacctgaacaagatcgacatcgccgcctgcaacaagaaggtc
accgagtcgctgatcaaggccggcgcgttcgactcgctcggtcacgcccgcaagggcttg
ttcctggtgcacaccgacgcggtcgattcggtgctgggcaccaagaaggccgaggcgatc
ggccagttcgatctgttcggcggcgacgacgggtgcaccgaagcggtgttcaccatcaag
gtgcccgacgacgagtgggaggacaagcacaagctcgcgctggagcgggagatgctgggc
ctctacgtgtccgggcatccgctcaacggggtggcgcacctgctggccgcgcaggtggac
acccagatcccggccatcctcgacggtgacgtgcccaacgagacccaggtgcgcgtgggc
ggcatcctcgcgtcggtcaaccggcgggtcaacaagaacgggatgccttgggcgtcagcg
caattggaggacctcaccggcggcatcgaggtgatgttcttcccgcacgcgtattccacc
tatggcgccgacatcgccgatgactccgtcgtgctgatcaacgccaaggtggccatccgc
gacgaccggatcagcctgatcgccaacgagcttgtggtgccggacttttccagcgcccag
gtgaaccggccgatcgcggtcagcctgccgacgcggcagtgcaccatcgacaaggtcagc
gcgctcaagcaggtgctggcgcggcatccggggacctcgcaggtgcatctgcggctgatc
agtggggaccggatcaccacgctggaactcgatgcgtcgcttcgggtgacgccgtcgccg
gcgttgatgggtgacctcaaggagctgctcggcccgggctgcctgggcggctag
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integrated database retrieval system
