Mycobacterium intracellulare subsp. yongonense: OEM_34450
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Entry
OEM_34450 CDS
T02732
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myo03016
]
OEM_34450
Enzymes [BR:
myo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OEM_34450
Transfer RNA biogenesis [BR:
myo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OEM_34450
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGP64980
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All DBs
Position
3699901..3701193
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AA seq
430 aa
AA seq
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MGEPSPDGPGSSAPGSTEPAPTPLPRPAEGVPPISVSVYEIEAAAQRLDRGRGPFAVDAE
RASGFRYSNRAYLIQIRRAGSGTVLIDPVSHGRDPLEALRPVAEVLGTDEWILHSADQDL
PCLAEVGMRPPALYDTELAGRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEW
LNYAALDVELLIELRAAIAEVLARQGKTDWAAQEFDYLRDTGWKDPGAAVRRDRWRRTSG
IHRVRDKRGLAAVRELWLTRDQIAQRRDIAPRRILPDSAIIDAALANPTTVEELVALPVF
GGRNQRRSAATWLAALEAARQNKNPPVDAEPPNGPPPPARWSRRKPEAAARLEAARAALS
EVSERVHVPTENLVSPDLVRRLCWDWEAAPDPFEAVEAFLRAGQARPWQRELVDPVLARA
LQAEGTEEAD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccgtcgcccgacgggccgggcagcagcgcgcccggcagcaccgaacccgcc
cccaccccacttccacgcccggccgaaggcgtcccgcccatctcggtgagcgtgtacgaa
atcgaggccgcggcgcagcgcctggaccgtgggcgcgggccgttcgcggtggacgccgag
cgggcgtcgggtttccgctactccaaccgggcctacctgatccagatccgccgggcgggc
tccggcaccgtgctgatcgacccggtgagccacggccgcgacccgctggaggcgctgcgg
ccggtggccgaggtgctgggcaccgacgaatggatcctgcactcggccgatcaggacctg
ccctgcttggcggaggtgggcatgcggccacccgcgctgtatgacaccgagctcgcgggc
cgcctggccgggttcgaacgcgtgaacctggccaccatggtcgagcggctgctgggtttc
gggctggccaagggccacggcgcggcggactggtccaagcggcccctgcccgccgaatgg
ctcaactacgccgcgctggacgtggaactgctcatcgagctgcgcgcggcgatcgcggag
gtcctcgccaggcagggcaaaaccgattgggccgcacaggaattcgactacctgcgggac
acgggctggaaagatccgggtgccgcggtgcgacgggaccggtggcgacgaacgtcgggg
atccatcgggtgcgcgacaagcgcggcctggccgcggtgcgcgaattgtggttgacgcgc
gaccagatcgcgcagcgccgcgacatcgcgccgcggcgcatccttccggactcggccatc
atcgacgccgcgctggccaacccgacgaccgtcgaggaactggtcgccctgcccgtgttc
ggggggcgcaatcaacgccgcagcgccgcgacgtggctggcggcgctggaggccgcgcgc
cagaacaagaatccgcccgtggacgccgaaccgccgaacgggccgccgccccccgcgcgg
tggagccggcgcaaaccggaggccgccgcgcggctcgaggccgcgcgggcggcgctgtct
gaggtctccgagcgggtgcacgtccccaccgagaacctggtctcgccggacctggtgcga
cggctgtgctgggactgggaggccgcgccggatcccttcgaggccgtcgaggcgtttctg
cgggccgggcaggcccggccctggcagcgggagctggtggatcccgtgctggcccgggcg
ctgcaggcggaaggcaccgaggaggccgattag
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