Mycobacterium intracellulare subsp. yongonense: OEM_40310
Help
Entry
OEM_40310 CDS
T02732
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Pathway
myo03420
Nucleotide excision repair
myo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OEM_40310
03430 Mismatch repair
OEM_40310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myo03400
]
OEM_40310
Enzymes [BR:
myo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OEM_40310
DNA repair and recombination proteins [BR:
myo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OEM_40310
MMR (mismatch excision repair)
Other MMR factors
OEM_40310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AGP65566
LinkDB
All DBs
Position
complement(4279719..4281839)
Genome browser
AA seq
706 aa
AA seq
DB search
MDAMPTVADPLTAGLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAQLVAGGHVAAG
QVLAVTFTQRAAGEMRSRLRAIDAAAGMGPAVGAVSALTFHAAAHRQLRYFWPRVVGDTG
WQLLDSKFAVVARAASRARLNASTDDVRDLAGEIEWAKASLIGPEEYPTAVAAAGRNIPL
DAAQIAGVYAAYEALKARGEHVTLLDFDDLLLHTAAAIENDPAVAEEFRDRYRCFVVDEY
QDVTPLQQRVLTAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDATVVRLERD
YRSTPQVVSLANQVIAAARGRVAGSKLHLVGQRPPGPAPTFHEHPDEPAEAAAVAASIAR
LIESGTPPSEIAVLYRVNAQSEIYEEALTEAGIAYQVRGGEGFFNRQEIKQALLALHRAS
ERATARGAEGPLPDVVRAVLEPLGLTAQEPVGTRARERWEALSALAELVDDEVAQRPQLD
FPGLLAELRMRADARHPPVVQGVALASLHAAKGLEWDAVFLVGLADGTLPISHALAHGAE
SEAVEEERRLLYVGITRARTHLALSWALARSPGGRQGRKPSRFLNGIAPQARAEPGPNKS
RRNRATATRCRICNNNLTTPAAVMLRRCETCAADIDEDLLLRLKAWRLDVAKEQKVPAYV
VFTDNTLIAIAELRPDDDEALIAIPGIGARKLEQYGPDVLELVRGR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatgccgacggtcgccgatccactgacagccgggctggacgacgagcagcgc
gaggccgtgctggctccgcgcggcccggtctgcgtgctggccggtgccggaacgggcaag
acccgcaccatcactcaccggatcgcccagctggtcgccggcggtcatgtcgccgccggc
caggtgctggcggtcacgttcacccagcgggcggcgggggagatgcgctcccggttgcgg
gcgatcgacgccgcggcgggtatggggccggccgtcggcgcggtctcggccctaaccttt
cacgccgccgcccaccggcagctgcggtacttctggccgcgggtggtcggtgacaccggg
tggcagctgctggacagcaagttcgcggtcgtggcccgggcggccagccgcgcccggctc
aacgccagcaccgacgacgtgcgcgacctggccggcgagatcgagtgggccaaggcgtcg
ctgatcggccccgaggaataccccaccgcggtggccgccgccgggcggaacatccccctg
gacgccgcccagatcgccggcgtctacgccgcctacgaggccctcaaagcgcgcggcgaa
cacgtcaccctgctcgatttcgacgacctgctgctgcacaccgcggccgcgatcgaaaac
gaccctgcggtggccgaggagttccgcgaccgctaccgctgcttcgtggtcgacgagtac
caggacgtcacgccgttgcagcagcgggtgctgacggcctggttgggcgaccgcgacgac
ctgacggtggtgggtgacgccaaccagaccatctactcgttcaccggggcctcgccgcgg
ttcctgctcgacttctcccgacgcttccccgacgccaccgtcgtgcgcctcgagcgcgat
taccggtccaccccccaggtggtctcgctggccaaccaggtgatcgccgcggcgcgcggg
cgggtcgccggcagcaagctgcacctggtgggccagcgcccgccgggtcccgcgccgacg
ttccacgagcatcccgacgagccggccgaggccgccgcggtcgcggcgtcgatcgcgcgg
ctcatcgaatccggtaccccgccatccgagatcgccgtgctgtaccgggtcaacgcgcag
tcggagatctacgaggaggcgctgaccgaggcgggcatcgcctaccaggtccgcggcggc
gagggattcttcaatcgccaggagatcaaacaggccctgctggcgctgcatcgggcctca
gaacgagccacggcgcgcggtgcggagggtcccctgcccgacgtcgtccgcgcggtgctg
gaaccgctgggcctgacggcccaggagccggtcggtacccgcgcccgcgagcgctgggag
gccctgagcgcgctggccgaactggtggacgacgaagtcgcccaacgcccgcagctggac
ttcccggggctgctggccgagcttcggatgcgcgccgacgcccggcacccgccggtggtg
cagggcgtcgcgctggcatcgctgcacgccgccaaggggctcgagtgggacgcggtgttc
ttggtcgggttggccgacggcacgctccccatctcacacgcgctcgcccacggcgccgag
agcgaggcggtcgaggaggagcgccgcctgctttacgtcggaatcaccagggcccgaacg
catttggcgctcagctgggcgctggcccgcagcccgggcgggcgtcaggggcgcaagccg
tcgcggttcctcaacggcatcgcaccccaggcgcgggccgagccggggccgaacaagtct
cggcgcaaccgggccaccgcgacccgctgccggatctgcaacaacaacctgacgaccccg
gcggccgtcatgctgcgccgctgcgagacctgcgcggccgacatcgacgaggacctgctg
ctccggctcaaggcgtggcggctggacgtcgccaaggaacagaaggtgcccgcctacgtc
gtcttcaccgacaacacgctgatcgccattgccgagctgcggcccgacgacgacgaggcg
ctgatcgcgattcccggcatcggcgcgcgcaagctggaacagtacggccccgacgtgctg
gagctggttcgcggtcgctga
DBGET
integrated database retrieval system
