Mycoplasma sp. SG1: JRW51_00300
Help
Entry
JRW51_00300 CDS
T11091
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
myp Mycoplasma sp. SG1
Brite
KEGG Orthology (KO) [BR:
myp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myp03032
]
JRW51_00300 (topA)
03400 DNA repair and recombination proteins [BR:
myp03400
]
JRW51_00300 (topA)
Enzymes [BR:
myp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JRW51_00300 (topA)
DNA replication proteins [BR:
myp03032
]
Prokaryotic type
DNA Topoisomerases
JRW51_00300 (topA)
DNA repair and recombination proteins [BR:
myp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JRW51_00300 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
URM52775
LinkDB
All DBs
Position
complement(43931..45856)
Genome browser
AA seq
641 aa
AA seq
DB search
MKLLITESPSKAVTIQKFVDKAFKDDKFEVISSKGHIYQLQKKGKLNLGIDLNTFEPQWE
IEPKHKKIVTQIVALAQKADVIYFATDADREGETIAYNLHNAISSKLKNKKIIFFRIVFN
EITPDAIIHAIKNPTVFSQPMINSQLTRRMLDRIIGFRLSRLLSVKINSRSAGRVQSIVL
KMIVERFKENQNFNKEKFWTLSLLLEHDFEVFLIGDKNNKYKNFTNKEIFLETKKQLNNS
ANLFDVKVTNKIKNPPKPFITATILKAGIANFGYSIQKINFILQSLYEGVKIEENNVGLI
SYPRTDSQRINEDFQIKILNKIKNDFGQDYLNNVSFTDTKKALNIQDAHEAIRITNLEYS
PNTIKQFLTPEQFNVYQLIYNNCLMMYMTQSKYKVYDFIFENNNFLFSKKIEMNQFLGFE
IISKKTKIEEQKTLNQKLITHFVKGENYQVLNVNWKEEETSPPPLLTESSIIDKLEKLGI
GRPSTYNDAIFKTKQSNYIAKQQGKLIPSYRGILTDENIEKYFSQFINYKFSSNLEETLD
KISQEKLDYKQFLEKFFKDFEDQIQACFKKMDYINSISLNIPCPSCDTGKLVIRNSKFGD
FIACSNYPECKYTATNRKLLFPLPIEKEDLTPKKFSKKSSD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattaattacagaatctccaagtaaagcagttacgattcagaaatttgtcgat
aaagcattcaaagatgataaatttgaagttatcagttcaaaaggccacatttatcaactt
caaaaaaaaggaaaacttaatcttgggatcgatttaaatacttttgaaccgcagtgagaa
attgaaccaaaacataaaaaaattgttacacaaattgttgcccttgctcaaaaagctgat
gttatttattttgccactgatgctgatagagagggtgaaacgattgcatataatcttcat
aatgctatatcttcaaagttaaagaataaaaaaattattttttttcggattgtttttaat
gaaataactcctgatgcaatcattcatgctatcaaaaatccaaccgttttttcacaacca
atgattaattcacaactgactagaagaatgttagatagaattatcggttttagattaagt
agattgctatcggttaaaattaattcacgatcagcaggtagagtccagtcaatcgtttta
aaaatgattgttgaacgctttaaagaaaaccaaaattttaataaagaaaaattttgaact
ctttctttacttttagagcacgattttgaagtatttttgattggagataaaaataataaa
tataaaaattttacaaataaagagatatttttagaaactaaaaagcaactaaacaattca
gctaatctttttgatgtaaaagttacaaataagattaaaaatccgcccaaaccttttata
accgcaaccattttaaaagctggaattgctaattttggttattctattcaaaaaattaat
tttattttacaatcgctttatgaaggggttaaaatcgaagaaaacaatgtcggacttatt
tcttatccaagaactgactcacaaagaataaatgaagattttcaaataaagattcttaat
aaaatcaaaaacgattttggtcaagattatcttaataatgtttcatttacagacaccaaa
aaagctcttaacattcaagatgctcatgaagcaattagaattacaaacttagaatattct
ccaaacacaattaaacaatttttaacacctgaacaatttaatgtttatcaattaatttat
aacaattgtttaatgatgtacatgactcaatctaaatataaagtttatgattttatattt
gaaaataataattttcttttttctaaaaaaatcgaaatgaatcaatttttaggatttgaa
ataatcagtaaaaaaacaaaaattgaagaacaaaaaactttaaatcaaaaattaataact
cattttgttaaaggagagaattaccaagttcttaatgttaactgaaaagaagaagaaacc
tcacctccaccgcttttaacagagtcttcaattattgataaattagaaaaattagggatt
ggaagaccatctacatataatgatgcgatctttaaaacaaagcaatctaattacatcgca
aaacaacaaggtaaattgattccatcttatcgaggtattttaactgatgaaaatattgaa
aaatatttttctcaatttattaactataaatttagtagtaaccttgaagaaacattagat
aaaatcagtcaagaaaagcttgattataaacagtttttggaaaaattttttaaagatttt
gaagatcaaatccaagcatgttttaaaaaaatggattatataaattctatttctttaaat
attccatgtcctagttgtgatacaggaaaactagttattagaaatagtaaatttggagat
tttatcgcttgtagcaattatcctgaatgtaaatatacagccacaaaccgtaaattatta
tttccattaccaattgaaaaagaggacttaactcctaagaagttttctaaaaaaagttca
gactaa
DBGET
integrated database retrieval system
