Mycolicibacterium sp. TUM20985: TUM20985_04290
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Entry
TUM20985_04290 CDS
T11065
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
myq Mycolicibacterium sp. TUM20985
Pathway
myq03030
DNA replication
myq03430
Mismatch repair
myq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM20985_04290
03430 Mismatch repair
TUM20985_04290
03440 Homologous recombination
TUM20985_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myq03032
]
TUM20985_04290
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_04290
Enzymes [BR:
myq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM20985_04290
DNA replication proteins [BR:
myq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM20985_04290
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM20985_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
AAA_14
Rad17
AAA_16
Mg_chelatase
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDX29882
LinkDB
All DBs
Position
453510..455393
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AA seq
627 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSTALESGRINHAYLFSGPRGCGKTSSARILARSLN
CERGPTPTPCGVCDSCVALAPNGPGNVDVVELDAASHGGVDDTRELRDRAFYAPAQSRYR
IFIIDEAHMVTTAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPK
TMRSLLERICAQEDVTVDDAVYPLVIRAGGGSPRDTLSVLDQLLAGSDGSVVAYPRALAL
LGATDLALIDASVDALAAGDATALFGAVESLIDAGHDPRRFATDLLERFRDLIVLQAVPD
AASRGVVDAPDDVLERMRDQAARLGTATLTRYAEVVHAGLGEMRGATAPRLLLEVVCARL
LLPSASDTEAALLQRIERLETRLNVSIPADEASHAGVAVEAAPAKQFTRRSTSPEPDEPD
EPDEPAEPVAAPPEARVEAKPIPPVAPPKPPPVEPTPPPVAPPTRTEPVAAASADPAPTG
EPDAAVVRSMWSTVRDKVRERRRPTDVMLDGAIVLAVEGDTLVLSHVSPPLASRLNEARN
VEIIRDALKDALGVNWNIRCEAGSPTAATPAARPQRVVETPPPPPEEDEESMLAQAVHEQ
TGPRRDPEEVALELLQSELGARRIEGA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctaccgcaagtaccgaccagcgaccttcgccgaggtggtcgggcaggaacac
gtcaccgagccgctgtccaccgcgctcgagtcgggccgcatcaatcacgcgtatctgttc
tccggtccgcgcggctgcggcaagacctcgtcggcccgcatcctggcgcgttcactgaac
tgcgaacgcggtcctaccccgacgccctgcggtgtgtgcgattcctgcgtggcgctggcc
cccaacggcccgggcaacgtcgacgtcgtcgaactcgacgcggcgagccacggcggcgtc
gatgacacgcgtgagctgcgcgaccgcgcgttctacgcccccgcccagtcgcgctaccgc
atcttcatcatcgacgaggcacacatggtcaccaccgcgggcttcaacgcgctgctgaag
atcgtggaggagccaccggaacacctgatcttcgtgttcgcgacgacggaacccgagaag
gtgttgcccaccatccgctcgcgcacccatcactatccgttccggctgttggcacccaag
accatgcgcagtctgctggaacgcatctgtgcgcaggaggacgtcaccgtcgacgacgcg
gtgtacccgttggtgatccgcgccggcggcggctctccccgcgacacgctgtcggtgctc
gaccagttgctcgcgggctccgatggcagcgtcgtcgcctacccgcgcgcgctggctctg
ctcggcgccaccgacctcgcgctgatcgacgcgtcggtcgacgcgctcgccgccggcgac
gccacggcgctcttcggcgcggtcgagtcgctcatcgacgccggccatgacccgcgccgt
ttcgccaccgatctactcgagcggttccgcgacctcatcgtgctgcaggccgtgcccgac
gccgcgtcgcggggtgtcgtcgacgcccccgacgacgtcctggagcgcatgcgcgaccag
gccgcgcggctcggcacggcgaccttgacccgctatgccgaggtggtgcacgccggtctc
ggcgagatgcgcggcgccaccgcaccacggctgctgctcgaggtcgtctgcgcgcgactg
ctgctgccctccgcgagtgacacggaagccgctctgctgcaacgcatcgagcgtctagag
acgcggttgaacgtgtccattccggccgatgaggcatcccacgccggcgtggccgtcgag
gcggcgcccgcaaagcagttcacccgccgcagtacctcgcccgagcccgacgagcccgac
gagccagacgagcccgccgagcccgtggccgcaccgccggaggcacgggtggaggccaag
ccaatcccgccggtggcgcccccgaaaccgccgccggtcgagccgacgccgccacccgtg
gcgccgccgacgcgaacggagcccgtggcggcagcgagtgccgaccccgcgccgacgggt
gagcccgacgcggctgtcgtgcgcagcatgtggtcgaccgtccgtgacaaggtgcgcgaa
cgccgacgccccacggacgtcatgctcgacggtgccatcgtgcttgcggtcgagggcgac
accctggtactgagccacgtgtcaccgccgttggcgagtcgcctcaacgaggcgcgcaac
gtcgagatcattcgggacgcactgaaggacgcgctcggcgtgaactggaacatccgttgc
gaggcgggatcgcccactgcggccacaccggccgctcgcccgcagcgcgttgtcgagacg
ccgccgcctccgcccgaggaggacgaggagagcatgctcgcccaagccgtccacgagcag
accggtccgcgtcgcgatccggaggaggtcgcgttggaactccttcagagcgagctgggg
gcgcgtcggatcgagggtgcctag
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