Mycobacterium antarcticum: TUM20985_08820
Help
Entry
TUM20985_08820 CDS
T11065
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
myq Mycobacterium antarcticum
Pathway
myq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TUM20985_08820
09124 Replication and repair
03420 Nucleotide excision repair
TUM20985_08820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myq03021
]
TUM20985_08820
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_08820
Enzymes [BR:
myq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM20985_08820
Transcription machinery [BR:
myq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TUM20985_08820
DNA repair and recombination proteins [BR:
myq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TUM20985_08820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Diphthami_syn_2_C
Motif
Other DBs
NCBI-ProteinID:
BDX30335
LinkDB
All DBs
Position
complement(912295..913944)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGEARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYSVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVM
RNKKIAPMLGARLDDDTIIVHASERGHIKQMLLKIGWPAEDLAGYVDGEAHPIALAQDGW
VLRDYQEMAADSFWAGGSGVVVLPCGAGKTIVGAAAMAKAGATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEVRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTENERMIYATAEPEERYKLCSTAHTKVAVVKSILARHPGEPTLVIGAYLD
QLDELGRELDAPVIQGSTKTAERETLFQAFRTGEIRTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccccctgatcgtgcagtccgacaagacggtgctgctagaggtcgaccac
gaactggcaggcgaggcgcgtgcggcgatcgccccgttcgccgaactcgaacgtgcgccc
gaacacatccacacctaccgcatcacccccctggccctgtggaacgcccgcgcggcgggc
catgacgccgagcaggtggtggacgcgctggtttcgttctcgcgctactcggtgccccaa
ccgctgctggtcgacatcgtcgacacgatggcgcgctacggccgcctgcagttggtgaag
agccccgtgcacggactggtactggtgagcctggaccgtgcggtgctcgaagaggttatg
cgcaacaagaagattgcgccgatgctgggcgctcgcctcgatgacgacaccatcatcgtg
catgccagcgagcgtggccacatcaagcagatgcttctcaagatcggttggcccgcagag
gatctggccggctacgtcgacggtgaggcccaccccatcgccctggcgcaggacggctgg
gtgctgcgcgactaccaggagatggccgccgactcgttctgggccggcgggtcgggcgtg
gtcgtgttgccctgcggggcgggcaagaccatcgtcggcgccgcagcgatggccaaggcg
ggtgcgacgacgctgatcctggtcaccaacaccgtggctggcagacagtggaagcgtgag
ctcatcgcccgcacgtcgctcaccgaagaagagatcggcgagtactccggggagcgcaag
gaagtccggccggtcacgatcgcgacctatcaggtgattacgcggcgcaccaagggggag
tacaagcatctggagctgttcgacagccgcgactgggggctgatcatctacgacgaggtg
cacctgttgcccgcgcccgtgttccggatgactgctgaccttcagtcccgccgccggctc
gggttgacggcgaccctcatccgcgaggacggccgcgagggtgacgtgttcagcctgatc
gggcccaagcgctatgacgcgccctggaaggacatcgaggcgcagggctggatcgccccc
gccgagtgcatcgaggtgcgcgtcacgatgaccgagaacgagcggatgatctacgcgacg
gcggaacccgaggaacgctacaaactgtgttcgacggcgcacaccaaggtggcggtggtg
aagtcgattctggcgcgtcatcccggcgagccgacgctcgtcatcggcgcctacctcgac
cagctggacgaattggggcgggagctcgacgcgcccgtgatccagggatcgacgaagacc
gcggaacgcgagaccctgttccaagccttccgcaccggtgagatccggacactcgtggtg
tcgaaggtcgccaacttctccatcgaccttcccgaagccagtgtcgccgttcaagtttcg
ggaacgttcggctcgcgtcaagaagaggcacagcgcctgggcaggctccttcgccccaag
gccgacggtggcggagcggtcttctactcggtggtgtcacgcgacagcctcgatgccgaa
tacgccgcacaccggcagcggttcctcgccgagcagggctatggctacgtcatcaaggac
gccgacgacctgctgggcccggcgatctga
DBGET
integrated database retrieval system
