Mycobacterium antarcticum: TUM20985_22330
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Entry
TUM20985_22330 CDS
T11065
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
myq Mycobacterium antarcticum
Pathway
myq00900
Terpenoid backbone biosynthesis
myq01100
Metabolic pathways
myq01110
Biosynthesis of secondary metabolites
Module
myq_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TUM20985_22330
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
TUM20985_22330
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
myq01006
]
TUM20985_22330
Enzymes [BR:
myq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TUM20985_22330
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TUM20985_22330
2.5.1.29 geranylgeranyl diphosphate synthase
TUM20985_22330
Prenyltransferases [BR:
myq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TUM20985_22330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF4185
DUF4072
Motif
Other DBs
NCBI-ProteinID:
BDX31686
LinkDB
All DBs
Position
complement(2299106..2300203)
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AA seq
365 aa
AA seq
DB search
MLSVESAAAPSAIELVGAVSERLRDHLRTRRRDAAYIGEHYAEMTAALEEFVLRGGKRLR
PAFAYWGWRAVAPAGRTADSDVLLLCSALELLHACALVHDDVIDASATRRGLPTVHRYFA
DLHRERDWRGSSEQFGVSTAILLGDLSLVWADDIVTSAELPPDAHRRVQRVWADIRTEVL
GGQYLDIVAEASGAETVESAMNVCTYKTASYTVSRPLQLGAAAAADRPDVQDAFHTLGTD
LGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLLAEAVQRADTADPLAAKLLRTAV
GTDLSESQVRELCQVIESVGALAAVESRIERLTGQALALLDAAPIDGTAKVGLAELARLA
SNRSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagcgtggagtctgctgcggcaccgtccgccatcgagttggtcggagccgtcagc
gaacgactgcgggatcatctccgcacccgtcggcgcgacgccgcctacatcggtgagcac
tacgccgagatgacggccgccctcgaggagttcgtcctgcgcggtggcaagcgcctgcgc
cccgcgttcgcctactgggggtggcgtgccgtcgcaccggccgggcggaccgccgactcg
gacgtcctgctcctgtgttcggcgctggaattgctgcacgcctgcgcgctggtgcacgac
gacgtcatcgacgcctccgccacccggcgcggcctgccgacggtgcaccgctacttcgcc
gacctgcaccgggagcgggactggcgagggtcgtcggaacagttcggcgtctcgaccgcc
atcctgctcggtgatctctccctggtgtgggcggacgacatcgtcacctcggccgagctg
ccacccgacgcccaccgccgcgtccagcgcgtctgggccgacatccgcaccgaggtgctc
ggcgggcaatacctcgacatcgtcgccgaggccagcggcgccgagacggtcgagtcggcg
atgaacgtctgcacctacaagacggcctcctacaccgtgtcccggccactgcagctcggc
gcggcagccgcggcggaccgacccgacgtgcaggacgccttccacaccctgggtaccgac
ctcggcgtggcatttcagctgcgcgacgacgtactcggcgtcttcggcgaccccgcggtg
accgggaagccctcgggagacgacctccgctcgggcaagcgcacggtgctgctggccgag
gccgtccagcgggccgacaccgcagatcccctggccgccaagctgttacgcacggcggtc
ggtacggacctgtccgagtcccaggtccgcgagctgtgccaggtcatcgagtcggtcggt
gccctcgccgcggtggagagccgcatcgagcggctcaccggccaggccctggcgttgctc
gacgccgcccccatcgatggcaccgccaaggtcggtctggcggaactcgcccgattggcg
tcgaaccggtccgcctga
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