Mycobacterium antarcticum: TUM20985_23260
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Entry
TUM20985_23260 CDS
T11065
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
myq Mycobacterium antarcticum
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
myq03051
]
TUM20985_23260 (pafA)
Enzymes [BR:
myq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
TUM20985_23260 (pafA)
Proteasome [BR:
myq03051
]
Prokaryotic proteasome
Bacterial regulatory particles
TUM20985_23260 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF244
Motif
Other DBs
NCBI-ProteinID:
BDX31779
LinkDB
All DBs
Position
2396545..2397903
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLIQLVTHDRAGERVLEDLLIDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLIVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAAAFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMCESTTMLKVGTAALVLEMIEAGVPF
RDFSLDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYSRAVEHLQTREPNAQIE
QVVDLWGRQLDAVESQDFAKVDTEIDWVIKRKLFERYQDRYDMELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAARITTDEDIDAAVNEPPQTTRAKLRGEFISAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVKRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcggcgaatcatgggcatcgagaccgaattcggcgtgacgtgcacttttcacggc
caccggcgcttgtctcccgacgaagttgcgcgctatctgtttcggcgcgtggtgtcgtgg
ggccgcagttccaacgtgttccttcgcaacggcgcccggctctatctggacgtgggctcc
caccccgagtacgcgaccgccgagtgcgacagcctcattcagctcgtcacccatgaccgc
gcaggtgagcgggtgttggaggatctgctgatcgatgccgagcagcggctcgccgacgag
ggcatcggtggggacatctacctgttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaactacctcatcgtgcgcgccggcgagttctccaggatctcggacgtg
ttgctgccgttcctcgtcacgcgtcaattgatctgcggcgcgggcaaagtgctgcagacc
cccaaggccgccgcgttctgcctcagccagcgggccgaacacatctgggagggcgtctcc
agcgccaccacccgcagcaggccgatcatcaacacccgcgacgaaccgcacgccgacgcc
gagaagtaccgtcgcctgcacgtcatcgtcggcgactccaacatgtgcgaatccaccacc
atgctgaaggtgggcaccgccgcgctggtgctcgagatgatcgaggcgggggtgccgttc
cgggacttctcgctcgacaatccgattcgcgcgatccgcgaggtcagccacgacctgacc
ggacgccgcccggtacggctggccggcggtcggcaggccagcgcgctcgacatccagcgg
gagtactacagccgcgccgtcgagcacctgcagacccgtgagcccaacgcccagatcgag
caggtcgtcgacctgtggggccgtcagctcgacgccgtcgagagccaggacttcgccaag
gtcgacaccgagatcgattgggtcatcaagcgcaagctgttcgagcgctaccaggaccgg
tacgacatggagctgtcggatcccaagatcgcgcagctggacctggcgtaccacgacatc
aagcgcggtcgcggcgtgttcgatctgctgcaacgcaagggtctggctgcccgcatcacc
accgacgaggacatcgacgcggcggtcaacgaacctccgcagaccacccgggcgaagctc
cgcggtgagttcatcagcgccgcgcaggccgccggtcgcgatttcaccgtcgactgggtg
cacctcaagctgaacgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgttcg
gtcgacgagcgagtcaagcgactgatcgccagtatgtag
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