Mycobacterium antarcticum: TUM20985_23310
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Entry
TUM20985_23310 CDS
T11065
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
myq Mycobacterium antarcticum
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myq03019
]
TUM20985_23310
Enzymes [BR:
myq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TUM20985_23310
Messenger RNA biogenesis [BR:
myq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TUM20985_23310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
HVO_A0261_N
MTR4-like_stalk
AAA_22
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDX31784
LinkDB
All DBs
Position
2401276..2404044
Genome browser
AA seq
922 aa
AA seq
DB search
MTKPPEAAPGDTQLDEFTRQLPFSLDDFQVRACRALEAGHGVLVCAPTGAGKTVVGEFAV
HLALAAGRKCFYTTPIKALSNQKHNDLVQRYGPERIGLLTGDQNINGDAPVVVMTTEVLR
NMLYADSPALQGLSHVVMDEVHFLADRMRGAVWEEVILHLSEDVRLVSLSATVSNAEEFG
GWIQTVRGDTTVVVDEHRPVPLWQHMMVGKRVFDLFEGADAQGARTLVDPDLIRHIAHRR
EADRLSDWQPRGRGRPGQRGGRPTLYRPPSRPDVISVLDHEGLLPAITFVFSRAGCDAAV
KQCLRSSLRLTDDEQRVRIAEVIDRRCADLDDADLGVLGYYEWREGLLRGLAAHHAGLLP
VFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKYNGEQHAPLTPGEYTQLT
GRAGRRGIDVEGHAVVLWHPDVEPADVAGLASTRTFPLRSSFAPSYNMTINLTQHMGPEQ
AHRLLERSFAQYQADRSVVGLVRGVTRGERMMDELAAELGGRDAPILEYARLRATISERE
RTQSRASRLQRRQAANDALANLRRGDIITIGQGRRGGLAVVLEPAGDREDPRPLVLTEDR
WAGRISSTDFSGSSVRLGSMSLPKRVEHRQPRVRRDVASALRSAAAGLHVPTGRPKRGQS
GHDQEHDVDPELAALREQLRAHPSHHVPDRDERVRVAERLLRIERDNADIQKKVDAATNS
LARTFDRIVVLLTERGFIEAADGDLKVTADGQLLARIYSESDLLVAECLRSGTWNGLDSA
ELAGVLSSVLFESRGDTPGASPVVEGATPAMRRALSQTRRAWSEIRADEQRHRLPASREP
DPGFVAAIHRWVTTGDLSAALAASDASGTGSPLSAGDFVRWCRQVLDLLDQVRNAAPTSS
LRTSAKRSIEAIRRGVVAVDAG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagccacctgaggccgcccccggtgacacccagctcgacgagttcactcggcag
ttgccgttctcgctcgacgacttccaggtccgtgcctgccgtgcgctcgaggccgggcac
ggcgtgctggtgtgcgctccgacgggcgccggcaagacggtggtcggcgagttcgcggtg
catctcgcgctcgcggcgggccggaagtgcttctacaccacgccaatcaaggcgctgagc
aaccagaagcacaacgatctggttcagcgctacggtcccgagcgcatcggccttctgacc
ggcgaccagaacatcaacggcgacgcaccggtggtcgtgatgaccaccgaggtcctccgg
aacatgctctacgcggattctcctgcactgcaaggtctttcacatgtcgtgatggacgag
gtgcacttcctcgccgaccggatgcgtggcgcggtgtgggaggaggtgatcctgcacctc
tccgaggacgttcgcctggtcagcctctcggcgacggtgagcaacgccgaggagttcggc
ggctggatccagaccgtacgcggtgacacgacggtcgtcgtcgacgagcaccggccggtg
ccgctgtggcagcacatgatggtcggcaagcgggtcttcgacctcttcgagggcgcagac
gcgcaaggtgcccgcaccctcgtcgaccccgacctgatccggcacatcgcccatcggcgg
gaggcggaccggttgtcggactggcaacctcgcggccggggacgtccgggccagcgtggc
ggccgcccgacgctgtaccggccgccgtcccggcccgacgtcatcagcgtcctcgatcac
gaagggctgctgcccgccatcacgttcgtgttctcccgtgccgggtgcgacgcggcggtc
aagcagtgcctccggtcgtcgttgcggctcacagacgacgagcagcgggtacgcatcgcg
gaggtgatcgaccgtcggtgcgccgatctcgacgatgccgacctgggagtgctgggctac
tacgagtggcgcgaagggctgctgcgcgggctcgccgcccaccatgcgggcctgctgccg
gtcttccgccacacggtcgaggagctgttcaccgcggggttggtgaaggccgtcttcgcc
acggagacactggcattgggcatcaacatgccggcccgcaccgtcgtgctcgagcggttg
gtgaagtacaacggtgagcaacacgcccctctgacgccgggggagtacacccagctgacg
ggtcgcgcaggccgccgcggcatcgacgtcgagggtcatgccgtcgtgctgtggcacccg
gacgtggagcccgccgacgtcgcgggtctggcgtccacccggacgttcccgctgcgcagc
tcgttcgcaccctcgtacaacatgacgatcaacctgacccagcacatgggtcccgaacag
gcacatcgactcctggagcggtcgttcgcgcagtatcaggcggaccggtccgtcgtcggg
ctggtccgcggtgtgacgcgcggtgaacggatgatggacgagctcgccgccgagttgggt
ggacgggacgcaccgatcctggaatacgcccgcctgcgcgcgaccatctccgaacgcgaa
cgaacccaatcccgcgcgtcgcggctgcagcgcaggcaggccgccaacgacgccctggcc
aacctgcggcgcggtgacatcatcacgatcgggcaggggcgccgcggcggcctcgcggtg
gtgctcgaacccgccggggaccgtgaggacccccgaccgctggtgctcaccgaagatcgc
tgggcgggccgcatttcgtcgaccgacttctccggatcgtcggtccggttggggtcgatg
agcctgccgaagcgggtcgagcaccggcagcccagggtgcgtcgcgatgtcgcgtcggcg
ctgcggtcggcggcggcggggttgcacgttcccaccggacggccgaaacgcggtcagtcg
ggccacgatcaggagcatgacgtggatcccgaactggcagcgttgcgcgagcagctgcgc
gcccatccctcgcatcacgttcccgatcgggacgagcgggtccgggtcgccgagcgcctc
ctgcggatcgaacgggacaacgccgacatccagaagaaggtcgacgcggcgaccaactcc
ctcgcccgcaccttcgaccgcatcgtggtgctgctcaccgaacgtggcttcatcgaggcg
gcggacggcgatctgaaggtcaccgccgacgggcagctgctggcccgcatctacagcgag
agcgatctcctcgtcgccgaatgtctgcgcagcggcacctggaacggcttggactccgcc
gagctggcaggtgtgctgtcctcggtgctcttcgagtcgcgcggcgacacgcccggtgcg
tcgcccgtcgtcgagggtgcgacgcccgccatgcggcgggctctgtcgcagacccgtcgg
gcgtggtcggagatccgggccgacgagcaacggcaccggctgcccgccagccgcgaaccc
gatcctggtttcgtggcggccatccatcgttgggtgaccaccggagacctgtcggccgcg
ctggcggcatcggatgcctcgggcaccggatcaccgctgtcggcaggcgatttcgtgcgc
tggtgtcggcaggtgctcgatctgctggaccaggtgcgcaatgccgcccccacatcgtcg
ttgcggacgtccgcgaaacgttcgatcgaggcgattcggcgcggcgtcgtggctgttgat
gcggggtag
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