Mycobacterium antarcticum: TUM20985_29900
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Entry
TUM20985_29900 CDS
T11065
Symbol
uvrA_1
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
myq Mycobacterium antarcticum
Pathway
myq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM20985_29900 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_29900 (uvrA_1)
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM20985_29900 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TUM20985_29900 (uvrA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
RsgA_GTPase
AAA_16
AAA_25
nSTAND1
AAA_22
DnaJ_CXXCXGXG
NACHT
ScfRs
Viral_helicase1
DUF1421
FtsK_SpoIIIE
cobW
Motif
Other DBs
NCBI-ProteinID:
BDX32443
LinkDB
All DBs
Position
complement(3050821..3053730)
Genome browser
AA seq
969 aa
AA seq
DB search
MEPERDQLADRLIVKGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLY
ARAGTAHCPVCGERIARQTPQQIVDQVLAMEEGTRFQVLAPVVRTRKGEFVDLFEKLNAQ
GYSRVRVDGVVHTLTDPPKLKKQEKHDIEVVVDRLSVKASSKQRLTDSVETALGLADGIL
VLEFVDADEDASHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECTGLGIRKE
VDPDLVVPDPDLTLADGAIAPWAMGHNADYFTRMLEGLGETLGFDVDTPWRKLPAKARKA
ILEGCDEQVHVRYKNRYGRTRSYYADFEGVMAFLHRRMEQTESEQMKERYDGFMRDVPCP
VCEGTRLKPEILAVSLAAGDDAKSIAQVCELSIADCSKFLNGLTLGTREHAIAGQVLKEV
QSRLGFLLDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRD
NRRLIDTLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGLIVHSGTYADLLTN
PESITGAYLSGKESIEVPAIRRPIDRKRQLTVVGARENNLREIDVSFPLGVLTAVTGVSG
SGKSTLVNDILASVLANKLNGARQVPGRHTRINGVDQLDKLVRVDQSPIGRTPRSNPATY
TGVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCE
VCHGARYNRETLEVHYKGKTISEVLDMSIEEATGFFEPITSIYRYLKTLVDVGLGYVRLG
QPAPTLSGGEAQRVKLAAELQKRSTGRTVYVLDEPTTGLHFEDIRKLLKVINGLVDKGNT
VIVIEHNLDVIKTSDWIVDMGPEGGGGGGMVVATGTPEDVAAVSESYTGQFLAEMLPTPA
PAKRRRKVS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagagagggatcagttggctgaccgcctgatcgtcaagggagcgcgcgagcac
aacctgcgaggcatcgacgtcgacctgccacgcgactcgttgatcgtcttcaccggattg
tccggttcgggcaagtcatcgttggctttcgacaccatcttcgccgagggacagcggcgt
tacgtcgagtcgctctcggcctacgccaggcagttccttggccagatggacaagcccgac
gtcgacttcatcgagggtctttcgcctgcggtgtcgatcgaccagaagtcgaccaaccgc
aacccgcgctcgaccgtcggcaccatcaccgaggtctacgactacctgcggctgctctac
gcccgcgcgggcaccgcgcactgccccgtgtgcggtgagcgcatcgcccggcagacgccg
caacagatcgtcgaccaggtgttggcgatggaggagggcacccggttccaggtgctcgct
ccggtcgtgcggacgcgcaagggcgagttcgtcgacctgttcgagaagctgaacgcccag
gggtacagccgcgtacgcgtcgacggcgtcgtgcacaccctgaccgatccgccgaagctc
aagaagcaggagaagcacgacatcgaggtggtcgtcgaccgcctcagcgtcaaggccagt
tccaagcaacgcctgaccgattcggtcgagacggcgctcgggctcgccgacggcatcctg
gtgctcgagttcgtcgacgcggacgaggatgcgtcgcatcgtgaacaacgattctccgag
aaactcgcctgccccaacgggcacgcccttgcggtggacgacctcgaaccgcggtcgttc
tcgttcaactcgccctatggcgcctgcccggagtgcaccggtctcggcatccgcaaggag
gtcgaccccgacctcgtggtgcccgacccggatctgaccctcgccgacggtgccatcgca
ccctgggcgatgggccacaacgccgactacttcacccggatgctcgaagggctcggcgag
acactgggattcgacgtcgacaccccgtggcgcaagctgcccgccaaggcgcgcaaggcc
atcctcgagggctgcgacgagcaggtgcacgtccgatacaagaaccggtacggccgcact
cgctcgtactacgccgacttcgaaggcgtgatggcgttcctgcaccgccgcatggagcag
accgagtccgaacagatgaaggaacgctacgacggcttcatgcgcgacgtcccgtgtccg
gtctgcgagggcacgcgcctcaagccggagatcctcgcggtcagcctcgccgcgggagac
gacgcgaaatccatcgcgcaggtctgcgagttgtcgatcgccgactgttcaaagttcctc
aacgggctcacgctcggcacgcgtgagcatgccattgcgggccaggtgctcaaggaggtc
cagtcgcggctgggcttcctgctcgacgtcggcctggactacctgacgctgtcccgcgcg
gcaggcacgctctccggcggtgaggcacaacgcattcggctcgccactcagatcggctcc
gggctcgccggtgtgctgtacgtgctcgacgagccctcgatcgggttgcaccagcgcgac
aaccgcaggctgatcgacacgctggtccgcctgcgggatctcggcaacacgttgatcgtc
gtcgaacacgatctcgataccatcgcccacgccgactgggtcgtcgacatcggtcccgcg
gcgggtgagcacggtggcctcatcgtgcacagcggcacgtatgccgacctgttgaccaac
cccgaatccatcaccggtgcctacctttccggcaaggagagcatcgaggtgccggccatt
cggcgtcccatcgatcgcaagcggcagctcacggtcgtcggcgccagggagaacaacctg
cgcgagatcgacgtgtccttcccgctgggcgtgctgaccgcggtcaccggcgtctcgggg
tccggcaagtccacgctcgtcaacgacatcctggcgtccgttctggcgaacaagctcaac
ggcgcgcgtcaggttcccggtcgccacacccggatcaacggagtcgaccagctcgacaag
ctggtgcgcgtcgaccagtcgccgatcggacgcacgccgcggtccaaccccgccacctac
acgggtgtcttcgacaagattcggaccctgttcgcggccaccaccgaggcgaaggtccgc
ggctaccagccgggtcggttctccttcaacgtcaagggcggccgctgcgaggcgtgctcg
ggtgacggcaccatcaagatcgagatgaacttcctcccggacgtgtacgtgccgtgcgag
gtctgccacggcgcccggtacaaccgggaaacgctcgaggtgcactacaagggcaagacc
atctccgaggtcctcgacatgtcgatcgaggaggcgacgggcttcttcgagccgatcacg
tcgatctaccgctatctgaagaccctcgtcgacgtggggctcggctacgtgcggctcggg
cagccggcacccacgctgtccggaggtgaggcccagcgcgtgaagttggccgccgaactg
cagaagcggtcgacgggacgcacggtctacgtgctcgacgagccgaccaccgggctgcac
ttcgaggacatccgcaagttgctcaaggtcatcaacggcctggtcgacaagggcaacacg
gtcatcgtcatcgagcacaacctcgacgtcatcaagacctcggactggatcgtcgacatg
ggtccggagggcggcggcgggggcggtatggtcgtcgccaccggcaccccggaggacgta
gccgcggtgtcggagagctacaccggtcagttccttgccgagatgttgccgacgccggcg
cccgcgaagaggcggcgcaaggtctcctga
DBGET
integrated database retrieval system
