Mycobacterium antarcticum: TUM20985_30130
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Entry
TUM20985_30130 CDS
T11065
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
myq Mycobacterium antarcticum
Pathway
myq03030
DNA replication
myq03410
Base excision repair
myq03420
Nucleotide excision repair
myq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM20985_30130
03410 Base excision repair
TUM20985_30130
03420 Nucleotide excision repair
TUM20985_30130
03440 Homologous recombination
TUM20985_30130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myq03032
]
TUM20985_30130
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_30130
Enzymes [BR:
myq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM20985_30130
DNA replication proteins [BR:
myq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TUM20985_30130
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TUM20985_30130
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM20985_30130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BDX32466
LinkDB
All DBs
Position
complement(3075486..3078182)
Genome browser
AA seq
898 aa
AA seq
DB search
MSPAKTDTKPTLMLLDGNSLAFRAFYALPAENFKTQGGLTTNAVYGFTAMLINLLRDEQP
THIAAAFDVSRQTFRAEKYPEYKAGRSATPDEFRGQIDITKEVLVALGITALAEAGFEAD
DIIATLATQAEAEGYRVLIVTGDRDALQLVSPDVTVLYPRKGVSELTRFTPDAVVEKYGL
TPAQYPDFAALRGDPSDNLPGIPGVGEKTASKWIIEYGSLQALVDQVDTVKGKVGESLRA
NLSHVILNRDLTELVKDVPLAQTPDTLRMMPWDRDQIHRLFDDLEFRVLRDRLFETLASA
DPEVEQGFDVRGGVLERGQLASWLAEHGAGRRFGLAVVGTHLAFDSDATAVAIVSADGEG
CYFDTSSLSQEDEAALAAFLADPAVPKALHEAKLAMHDLAGRGWETKGVTSDTALAAYLV
RPGQRSFALDDLAVRYLKRELRAENPEQQQLSLLDDDEGVDDQAVQTLLLRASAVADLAD
ALDEELERIDSSALLGDMELPVQRVLAQLETTGIAIDLELLGQLQSRFANLIRDAAEAAY
AVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQGLFDKTGHPFLQHLLAH
RDATRLKVTVDGLLNAVGSDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGRQIREG
FVVSKGYAELMTADYSQIEMRIMAHLSGDAGLIEAFNTGEDLHSFVASRAFGVPIDEVTA
ELRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMDAYFSRFGGVRDYLQSVVEQARK
DGYTSTVLGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMINTDNAIRDSG
LQSRMLLQVHDELLFEVADGEREKLDELVRDNMGGAYPLDVPLEVSVGYGRSWDAAAH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgccaagaccgacaccaagcccacattgatgcttttggacggcaactcgctg
gcgttccgtgcgttctacgcgctgcccgcggagaacttcaagactcagggcggattgacc
accaacgcggtctacggcttcacggccatgttgatcaacttgcttcgcgacgagcagccc
acgcatattgccgccgccttcgacgtctcccggcagaccttccgcgccgagaagtatccc
gagtacaaggcaggccggtccgctacccccgacgagtttcgcggtcagatcgatatcacc
aaggaagtgcttgtcgcactgggcattacggcgctggccgaggccggtttcgaggctgac
gacatcatcgcgaccttggccacgcaggccgaggccgagggctaccgcgtcctaatcgtc
accggcgaccgcgacgcactgcagctcgtcagccccgatgtcaccgtgctctatccgcgc
aagggtgtgtcggagctgacccgcttcaccccggacgcggtggtcgagaagtacgggttg
acgccagctcaatacccggacttcgcggcgctgcgtggggacccgagcgataacttgccc
ggcatacccggagtgggggagaagacggcgtccaagtggatcatcgaatacggctcactg
caggcgctcgtcgaccaggtcgacaccgtcaagggcaaggtcggagaatcgttgcgcgcc
aacctctcccacgtcatcctcaaccgcgacctcaccgagctggtcaaggacgtgccgctg
gctcagacaccggacaccctacggatgatgccgtgggaccgcgaccagatccaccgactc
ttcgacgacctggagttccgcgtccttcgcgatcggctcttcgaaacgctcgcgtcggcc
gatcccgaggtggagcagggcttcgacgtgcggggcggcgtcctggagcgcggccaactc
gcgtcgtggctggccgagcacggcgccggtcgcagattcgggctcgccgtcgtcggcacg
catcttgcgttcgattccgatgcgaccgcggtggcgatcgtctcggccgacggcgagggc
tgctacttcgacacctcgtcgctgagccaagaggacgaggccgcactggctgcgttcctg
gcggaccccgcggtgccgaaggcgctgcacgaggccaagctcgcgatgcacgatctcgcc
ggccgtggctgggagacgaagggcgtcacctcggacaccgcgctggcggcatacctggtg
cggccaggtcagcgcagctttgcgctcgacgacctcgcggtacggtatctcaaacgtgag
ctacgggcggaaaaccctgagcagcagcagctctcgttactcgacgacgacgaaggcgtc
gacgatcaggccgttcagacgctgctactgagggcgtcggcagtcgccgacctcgccgac
gcactcgatgaggaactggagcgaatcgactcctcggcgcttttgggcgacatggagttg
ccggtgcaacgcgtgctcgcacagctggagacgacgggcatcgccatcgacctcgagctg
ctcggccagctgcagagccggttcgcgaacctcattcgcgacgccgccgaggccgcgtac
gccgtgatcggcaagcagatcaacctcggttcgcccaagcagctgcaggtggtcctgttc
gacgagctcgagatgccaaagaccaagcgcaccaagaccggctacaccaccgacgccgac
gccctgcagggactgttcgacaagaccgggcaccccttcctgcagcatctgctcgcccac
cgcgacgcgacgaggctcaaggtcaccgtcgacgggctcctcaacgccgtcggctccgat
gggcgaattcacaccacgttcaaccagacgatcgcggccacggggcggctgtcgtcgacg
gagccgaacctgcagaacatcccgatccggacggaagccggccggcagatccgcgagggt
ttcgtcgtcagcaagggttacgccgagctgatgacggcggactacagccagatcgagatg
cggatcatggcgcacctgtccggcgacgcgggactcatcgaggcgttcaacaccggggag
gacctgcattccttcgtcgcctccagggcgttcggcgtgccgatcgacgaggtcaccgcc
gagttgcgccgccgggtgaaggccatgtcctatgggctggcgtacgggctgagcgcctac
ggcctggcggcccaactgaagatctccaccgaggaggccaaggtgcagatggatgcctac
ttctcacgcttcggcggggtgcgggactacctgcagtcggtggtggagcaggcgcgcaag
gacgggtacacgtcgacggtgctgggcaggcgccgctatctcccggaactggacagcagc
aaccgcaacgtccgggaggcggccgagcgggcggcgctcaacgcacccattcagggcagc
gccgccgacatcatcaaggtggcgatgatcaacaccgacaacgcgattcgcgactcggga
ctgcaatcgcggatgctcctgcaggtccacgacgaactgctgttcgaggtggccgacggc
gagcgcgagaaactcgacgaactggtgcgcgacaacatgggcggggcctatccgctcgac
gtgccactcgaggtgtcggtcgggtacggccgcagctgggatgcggcggcgcactag
DBGET
integrated database retrieval system
