Mycolicibacterium sp. TUM20985: TUM20985_34680
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Entry
TUM20985_34680 CDS
T11065
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
myq Mycolicibacterium sp. TUM20985
Pathway
myq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TUM20985_34680 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myq03021
]
TUM20985_34680 (rpoD)
Transcription machinery [BR:
myq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUM20985_34680 (rpoD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Tub_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BDX32921
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All DBs
Position
3549512..3550954
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AA seq
480 aa
AA seq
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MAHAHATESCKTEGVHVAATKVSPAIEEPVKRTVTKAPAKKAAAKAATGTAPAKRAAKAP
AKKAAGAGTRAKKGAASEGAEVTTTDVLETGDENEAEPTELEADADIELEDLEVVVVDDA
VETVVDGKAKDADEASGDDDIAEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSV
RAYLKQIGKVALLNAEEEVELAKRIEAGLYCTQKMTEFAEAGEKLTTAQRRDYLWICRDG
DKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYAT
WWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPE
KVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLS
EREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacgcccacgctaccgagtcttgcaagaccgaaggggtgcacgtggcagcgacg
aaggtaagcccggcgatcgaggagccggtgaagcgcaccgtcaccaaggctcccgccaag
aaggccgcggcgaaggccgccaccggcaccgcgcccgccaagcgggccgcgaaggcgccg
gccaagaaggccgccggagccggtacgcgagcgaagaagggcgccgccagcgagggtgcc
gaggtcacgacgaccgacgtcctcgagaccggcgacgagaacgaagccgagcccaccgaa
ctggaagccgatgcggacatcgagctcgaggatctcgaggtcgtcgtggtcgacgacgcg
gtggagacagtcgtcgacggcaaggccaaggacgcggacgaggcttccggtgacgatgac
atcgccgagccgtccgaaaaggacaaggcatccggcgacttcgtgtgggacgaagaagag
tccgaggcactgcggcaggcgcgcaaggacgccgagctcactgcatcggccgactcggtg
cgcgcgtacctgaagcagatcggcaaggtcgcgctgctcaatgccgaggaagaagtcgag
ctggccaagcgcatcgaggcgggcctgtactgcacccagaagatgacggagttcgccgag
gcgggcgagaagctgaccaccgcccagcgccgcgactacctgtggatctgccgcgatggc
gacaaggcaaagaatcacctgctggaagccaacctgcgtctggtcgtctcgctggccaag
cgctacaccggccgcggaatggccttcctcgacctcatccaggaaggcaacctgggtctg
atccgcgcggtcgagaagttcgactacaccaagggttacaagttctcgacgtacgccacc
tggtggatccgtcaggccatcacccgcgccatggccgatcaggcccgcaccatccgcatc
ccggtgcacatggtcgaggtcatcaacaaactcggacgcatccagcgtgagctgctgcag
gacctgggccgcgagcccacgcccgaagagctcgccaaggaaatggacatcacgccggag
aaggtgctggagatccagcagtacgcgcgtgagccgatttcgctcgaccagacgatcggt
gacgagggcgacagccagctcggcgacttcatcgaggactccgaggccgtggtggcggtg
gacgccgtctccttcacgcttctgcaggatcagcttcagtcggtgctcgagacgctctcc
gagcgcgaggcgggcgtcgtgcggctgcggttcggcctcaccgatggtcagccgaggaca
ctcgacgagatcggacaggtctacggcgtcacgcgggagcggattcgtcagatcgagagc
aagacgatgtcgaagttgcgccaccccagccgttcccaggtcctgcgcgactacctggac
tag
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integrated database retrieval system
