Mycobacterium antarcticum: TUM20985_34930
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Entry
TUM20985_34930 CDS
T11065
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
myq Mycobacterium antarcticum
Pathway
myq00300
Lysine biosynthesis
myq00470
D-Amino acid metabolism
myq01100
Metabolic pathways
myq01110
Biosynthesis of secondary metabolites
myq01120
Microbial metabolism in diverse environments
myq01230
Biosynthesis of amino acids
Module
myq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TUM20985_34930 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TUM20985_34930 (dapF)
Enzymes [BR:
myq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TUM20985_34930 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
OTU1_UBXL
MBG_3
Motif
Other DBs
NCBI-ProteinID:
BDX32946
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Position
complement(3573746..3574630)
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AA seq
294 aa
AA seq
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MMFAKGHGTENDFVLLPDVGARLALTPGVVSALCDRRRGLGADGVLRVTTADAALAAGVF
DAIPEGVAADDWYMDYRNADGSIAQMCGNGVRVFAHYLRVSGLEQRDDFVVGSLAGPRPV
VLRDVDGTSADVTVDMGKANQFGTGSAVVGGRRFGGVAVDVGNPHLACVDASLSVAELAA
LDVGAPVWFDAAQFPEGVNVEVLTAPAGGAITMRVHERGVGETRSCGTGTVAAAVAGLRH
RGSSTGTLRVRVPGGQVTVTITDTTSYLRGPSVLVAQGELSDDWWRARQENSNA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgatgttcgccaagggacacggcacggagaacgacttcgtgctgctgcccgacgtcggt
gcccggctggcgctgacgccgggggtggtgtcagcgctgtgcgaccgccgccgcgggctc
ggcgccgacggcgtactccgcgtgacgacggcggacgccgcgctggctgccggggtgttc
gacgcgattccggaaggcgtcgcggccgatgactggtacatggactaccgcaacgccgac
ggatcgatcgcccagatgtgcggtaacggggtccgcgtgttcgcgcactacctgcgggtc
agcggcctcgagcagcgcgacgatttcgtcgtcggctccctggccgggccgcgaccggtc
gtcctgcgcgacgtcgacggcacgtcggccgacgtcaccgtcgacatgggcaaggccaac
cagttcggcaccggctcggcggtggtgggcggacgccgcttcggcggcgtcgcggtcgac
gtcggcaatccgcacctcgcctgcgtcgacgcatcgctgagcgttgcggagttggctgcc
ctcgacgtcggcgcccccgtgtggttcgacgcggcgcagttccccgagggtgtgaacgtg
gaggtgctgacggctccggccggaggcgccatcacgatgcgcgtgcacgagcgaggcgtc
ggcgaaacccgttcgtgtggaacgggaaccgtcgctgcggcggtcgccggcctccggcac
cggggttccagcacgggcaccctgcgggtccgggtcccgggcggtcaggtgaccgtgacg
atcaccgacaccaccagctatctgagggggccgtccgttctggtggcccagggcgagctg
tccgacgactggtggcgcgcccggcaggaaaattcgaatgcgtaa
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