Mycolicibacterium sp. TUM20985: TUM20985_35690
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Entry
TUM20985_35690 CDS
T11065
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
myq Mycolicibacterium sp. TUM20985
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myq03016
]
TUM20985_35690 (truB)
Enzymes [BR:
myq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TUM20985_35690 (truB)
Transfer RNA biogenesis [BR:
myq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TUM20985_35690 (truB)
Prokaryotic type
TUM20985_35690 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
DUF5785
Motif
Other DBs
NCBI-ProteinID:
BDX33022
LinkDB
All DBs
Position
complement(3647388..3648275)
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AA seq
295 aa
AA seq
DB search
MTPPPPGLVVVDKPAGMTSHDVVGRCRRLFGTRKVGHAGTLDPMATGVLVVGIERATKIL
GLLTATEKAYAATIRLGQTTSTEDAEGAVLQSVSAAHVADSDIEEAIAGQRGEISQVPSA
VSAIKVDGQRAYTLAREGKHVELAARTVRIERFDVVAVRRVAECVDVDVEVVCSSGTYVR
ALARDVGDALGVGGHLTALRRTRVGRYGLGEAHTLDELAESPRLSYSLDEACLLGFPRRE
LTDEEAESTTHGRSLAPCGFHGVYAATAPDGRVMALLVDDGPRTKSVVVVRPSTL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaccccctccgggcctcgtcgtcgtcgacaagcccgccgggatgacgagccac
gacgtggtgggccgctgccgcaggctgttcggcacccgcaaggtggggcacgccggaacg
ttggatccgatggccaccggggtactggtggtgggcatcgagcgggcgacgaagatcctc
ggtctgctgaccgcgaccgagaaggcctacgccgccaccatccgactggggcagaccacg
tctaccgaggacgccgaaggcgctgtcctacagagtgtctcggccgcccacgtcgccgat
tccgacatcgaggaggcgatcgccggccagcgtggcgagatcagtcaggtcccctcggcg
gtcagcgcgatcaaggtcgacggccaacgggcgtacacgttggcgcgtgagggcaagcac
gtggagctggcggcacgcaccgtgcgcatcgaacggttcgacgtcgtcgccgtccgccgc
gttgcggagtgcgtggacgtcgacgtggaggtcgtctgttcgtcgggcacctacgtgcgg
gcgttggcccgcgatgtcggcgatgcgctcggcgtgggcggacacctcaccgctctgcgc
cgcacgcgggttggccgatatgggctgggggaggcgcacaccctcgacgagctggcggaa
tcaccgcgactgagttactcattggacgaggcgtgcctgctggggttcccccgccgtgag
ctcaccgacgaggaggccgaatccacgacgcatggacgatcgttggcgccgtgcggcttc
cacggcgtttacgccgcaacggcgccggacggccgggtgatggcgctactcgtcgacgac
ggtccgcggacgaagtccgtggtcgtcgtcaggccgtcgacgctgtag
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