Mycolicibacterium sp. TUM20985: TUM20985_43280
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Entry
TUM20985_43280 CDS
T11065
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myq Mycolicibacterium sp. TUM20985
Pathway
myq03420
Nucleotide excision repair
myq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TUM20985_43280
03430 Mismatch repair
TUM20985_43280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_43280
Enzymes [BR:
myq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM20985_43280
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TUM20985_43280
MMR (mismatch excision repair)
Other MMR factors
TUM20985_43280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Helicase_Sgs1
CBP
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BDX33781
LinkDB
All DBs
Position
complement(4407519..4409651)
Genome browser
AA seq
710 aa
AA seq
DB search
MPSQAPAAASSLLTRLLADLDEEQREAVQAPRGPVCVLAGAGTGKTRTITRRIAYLVASG
HVAPSQVLAVTFTSRAAGEMRGRLRSLDEQGAEGVGTGAVQAMTFHAAARRQLQYFWPRV
VGDTGWELLDSKFGVVAQAANRASIQASTDDVRDLAGEIEWAKSSLISPEGYAAAVAEAG
RDIPLDAAKIATVYAGYEAMKARRDGTTLLDFDDLLLHTAAAIESDAAVASEFRDRYRCF
VVDEYQDVTPLQQRVLDAWLGDRDDLTVVGDANQTIYSFTGATPTYLLDFSRRFPEASVV
RLERDYRSTPQVVSLANRVIAMARGRMAGSKLHLIGQRDAGPAPSFDEHPDEVAEAAAVS
KAIKKLIQAGTAPSEIAVLYRINAQSEVYEEALTGAGVAFQVRGGEGFFSRQEIRQALAA
LQRAAGHIDAVGADLPPVIRELLEPLGLTAEEPQGVRARERWEALVALVELVEEEVAVRP
ALDMRALLTELKQRADARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAR
GADSEQVEEERRLLYVGVTRARVHLALSWALARTPGGRQGRRPSRFLNGVAPQAKVDDGP
SKPRRQRGAAPRCRICNGALSSPASIMLRRCETCPSDLDDELLAQLKEWRLETSKEMKVP
AYVVFTDNTLMAIAETLPTDEAALVAIPGIGARKLEQFGPDVLALVKARR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccaggctccagcggccgcctcctcactgctcacccgactactcgccgatctc
gacgaggagcagcgtgaggcggttcaggcgccgcgcggtccggtatgcgtgctggctggt
gcgggaaccggcaagacgcgcaccatcacccgccgcatcgcctacctcgtggcgtcgggt
cacgtcgcgcccagtcaggtgctcgccgtgacgttcacgtcgcgagccgcgggggagatg
cgcggccgcctgcggtcactcgacgagcagggcgccgagggcgtcggcaccggggccgtg
caggccatgacgttccacgcggcggcccgacggcagctgcagtacttctggccgcgggtc
gtcggcgataccgggtgggagctgctggacagcaagttcggcgtcgtcgcgcaggcggcc
aaccgggcgtcgatccaggccagcaccgacgacgtgcgcgacctcgccggggagatcgag
tgggccaagtcgtcgctgatcagcccggagggctatgcggcggctgtcgcggaggccggt
cgcgacatcccgctcgacgccgccaagatcgcgacggtctacgccggctacgaggccatg
aaggcccggcgcgacggcaccaccctgctggacttcgatgacctgttgttgcacaccgct
gcggccatcgagagcgacgccgcggtggcgagcgagttccgggacaggtaccgatgtttc
gtcgtcgacgagtatcaagacgtcaccccgctgcagcagcgggtgctcgacgcctggctc
ggtgaccgtgacgacctgacggtggtcggcgacgcgaaccagaccatctactcgttcacg
ggcgccacccccacctacctgctcgacttctcgcgccgattccccgaggcgtcggtcgtg
cggctggagcgcgactaccggtccacgccgcaggtggtgtccctggccaatcgcgtaatc
gcgatggcgcgcggccgcatggcggggagcaaattgcacctgatcggtcaacgcgacgcc
gggcccgcaccgagtttcgacgaacatccggacgaggtcgccgaggccgccgccgtctcg
aaggccatcaagaagttgatccaggcgggcaccgcgccatcggagatcgcggtgctatac
cgcatcaacgcgcagtcggaggtgtacgaggaggcgctgacgggcgcgggagtggcgttc
caggtccgcgggggtgagggcttcttcagccgccaggagattcgtcaggcactggcggca
ctgcagcgggcggcggggcacatcgacgcggtgggcgccgatctgccgccggtgatccgc
gagctgctggaaccgctgggactcactgccgaggagccccagggtgtgcgggcccgcgag
cggtgggaggcgctggtcgccctcgtcgaactcgtcgaggaggaggtggccgtgcgaccc
gctctcgacatgcgcgcactcctcaccgagctcaagcagcgcgcggacgcgcggcaccca
ccggtcgtgcagggcgtcaccctggcctcgctgcacgcggccaagggcctggagtgggac
gcggtgttcctggtcgggctcgccgacggcacactgcccatctcgcacgcgttggcccgc
ggggcagacagcgagcaggtggaggaggagcgccgactgctgtacgtcggagtcaccagg
gcgcgtgtgcatttggcgttgagctgggccttggcgcggacaccgggcggtcggcagggc
cgtcgcccgtcgcggttcctcaacggggtggctccccaggccaaggtcgacgacggcccc
agcaagccccgccgccagcgtggcgccgcaccgcgctgccgcatctgcaacggcgcactg
tccagtccggcctcgatcatgttgcgccgctgcgaaacctgcccctcggacttggacgac
gagctgttggcccagctgaaggagtggcggctggagacctccaaggagatgaaggtgccc
gcctatgtggtgttcaccgacaacaccttgatggcgatcgccgaaacgctgccgaccgac
gaagcggccctggtcgccatccccgggatcggtgcgcgcaagctcgagcagttcgggcca
gacgtcctggcgttggtcaaggctcggcgctga
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