Mycolicibacterium sp. TUM20985: TUM20985_45050
Help
Entry
TUM20985_45050 CDS
T11065
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
myq Mycolicibacterium sp. TUM20985
Pathway
myq00061
Fatty acid biosynthesis
myq00071
Fatty acid degradation
myq01100
Metabolic pathways
myq01212
Fatty acid metabolism
myq02024
Quorum sensing
myq04146
Peroxisome
Module
myq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TUM20985_45050
00071 Fatty acid degradation
TUM20985_45050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TUM20985_45050
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM20985_45050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
myq01004
]
TUM20985_45050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
myq04147
]
TUM20985_45050
Enzymes [BR:
myq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TUM20985_45050
Lipid biosynthesis proteins [BR:
myq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TUM20985_45050
Exosome [BR:
myq04147
]
Exosomal proteins
Exosomal proteins of breast milk
TUM20985_45050
Exosomal proteins of breast cancer cells
TUM20985_45050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Sorb
Motif
Other DBs
NCBI-ProteinID:
BDX33958
LinkDB
All DBs
Position
complement(4598734..4600608)
Genome browser
AA seq
624 aa
AA seq
DB search
MREDTDRAPHVVVRERSTAPQNGDAGEIAYRASSVARLFLDRVVATPQAEAFRFPDGGGW
KSVTWQQLGDRVHLVAAGLISLGIATEDRVALASSTRYEWALADFSVLCAGAATTTLYPT
TNARDIAFIVADSGSRVVIAEDQTQVDKLLERRAELPGVERIVIIDGQGDGEFVMTLAEL
EAAGEELLATSPDIVEKRVADLHSENLASIIYTSGTTGRPKGVRLPHRAWMYTAAAIDAV
DFLHADDLNFLWLPLAHAFGKVMLVLPLVIGYPTAIDGRVDKIVDNLAVVHPTFMGAAPR
IFEKAHARIQATIADESRAKQAVFRWAIRVGVAASAARESGRKSSPLQSVQQRIAERLVF
STIRDRFGGRLRFFVSGAAPLNEDIARWFDAIGIIVLEGYGMTETAAASFINRPNAYRFG
TVGLPFVGTEVRIADDGEILLRSPSVMTGYHNLPEATAEALDGDGWLYTGDIGTIDDDGF
LRVTDRKKDLFKTSQGKYVAPSAIATTFKAVCPYSTEMIVYGDAKPYCVALVSPDAEALM
DWAAKHGLANLSLSEVTRHPSAMELMGGYVDTLNEQLNRWEQIKKFAILDRELSVESGDL
TPSLKAKRSVIVKKSADVIARLYE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaggacaccgatcgcgcaccgcatgtcgtcgtgagggagcgaagcaccgctccc
caaaacggcgacgcgggcgagattgcctaccgggcgtcgtcggtcgcccggctgttcctg
gatcgcgtggtagcgacgccgcaggccgaggcgttccggttcccggacggcggcggttgg
aagagcgtcacgtggcagcagctcggagatcgggtccacctcgtcgctgccgggttgatc
tcgctgggtatcgctaccgaggaccgagtcgcgctggcgtcctcgacccgttacgagtgg
gccctcgccgacttctccgtgttgtgtgccggcgccgccaccaccaccttgtacccgacg
acgaatgcccgcgacatcgcgttcatcgtcgccgactcgggcagccgcgtcgtcatcgcc
gaagaccagacccaagtcgacaagttgctcgagcgtcgcgcagaactgcccggcgtcgaa
aggatcgtgatcatcgacggccagggggacggtgagttcgtgatgaccctcgccgaactc
gaagccgccggtgaagagctgctggctacgtctccggacatcgtcgagaagcgcgtcgcc
gaccttcattccgagaacctggccagcatcatctacacctccgggaccacggggcggccg
aagggagtgcggctaccgcaccgggcgtggatgtacaccgccgcagcgatcgacgccgtc
gacttcctccacgccgacgacctgaacttcctgtggctcccactggcgcatgcattcggc
aaggtcatgctcgtgttgccgctagtgatcggctacccgacggcgatcgacggtcgggtc
gacaagatcgtcgacaaccttgccgtcgtgcatccgacgttcatgggcgccgctccccgg
atcttcgagaaggcccacgcccgaatccaggcgacgatcgcggacgagagcagggcgaag
caggccgtcttccgctgggccatccgcgtgggagtcgccgcatccgcggccagggaatcc
ggacgaaagtcatcgcccctgcaatcggtgcagcagcggatcgccgaaagactggtgttc
tcgaccatccgggaccgcttcggtggacgactgcggttcttcgtttccggcgccgcaccg
ctgaacgaagacattgcgcgttggttcgacgccatcggcatcatcgtgctcgagggttac
ggcatgaccgagaccgcggccgcgtcattcatcaaccgccccaacgcataccggttcggc
accgtcggcctgcccttcgtcggcaccgaggtcaggatcgccgacgacggcgagatcctt
ttgaggagcccgtcggtgatgaccgggtaccacaacctgccggaagccaccgccgaagcg
ctcgatggcgacggctggctgtacacgggggatatcggcacgatcgacgatgacggattc
ctgcgcgtcaccgaccgcaagaaggatctcttcaagacctcgcagggcaagtacgtcgcg
ccgtcggcgatcgcaacgaccttcaaggcggtctgcccgtacagcaccgagatgatcgtc
tacggcgatgccaaaccctattgcgtggcgctcgtgagtccggatgccgaggctctcatg
gactgggcggccaagcacggtcttgcgaacttgtcgctcagcgaggtgacgcgccacccg
tcggccatggagttgatgggcggttacgtggacactctcaacgagcagctcaatcgatgg
gaacagatcaagaagttcgccatcctcgatcgcgagttatcggtcgagtcaggtgatctc
acgccgagcctcaaggcaaagcgcagcgtcatcgtgaagaagtcggccgatgtcatcgca
cgcctctacgaatga
DBGET
integrated database retrieval system
